RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 LINC00116Q8NCU8 138 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 CTCFLQ8NI51 663 aaPredicted RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 SYMPKQ92797 1274 aaKnown RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 EPSTI1Q96J88 318 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 NAA15Q9BXJ9 866 aaKnown RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 DCP1AQ9NPI6 582 aaPredicted RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 SAMSN1Q9NSI8 373 aaKnown RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 ARPP21Q9UBL0 812 aaPredicted RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 PARP3Q9Y6F1 533 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 V9GYY5 206 aaPredicted RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 ITIH6Q6UXX5 1313 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 SYNRGQ9UMZ2 1314 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 WTIPA6NIX2 430 aaPredicted RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 EFCAB8A8MWE9 144 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 AKR1B15C9JRZ8 316 aaPredicted RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 WNT7AO00755 349 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 SCG2P13521 617 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 RPS8P62241 208 aaKnown RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 FAM193AP78312 1265 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 MAP3K9P80192 1104 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 MECOMQ03112 1051 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 ZNF174Q15697 407 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 PFKFB3Q16875 520 aaPredicted RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 ERCC6LQ2NKX8 1250 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 CCDC178Q5BJE1 867 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 RC3H1Q5TC82 1133 aaKnown RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 LRRN4CLQ8ND94 238 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 CELF1Q92879 486 aaKnown RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 CCDC51Q96ER9 411 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 CTAGE1Q96RT6 745 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 SH3GLB2Q9NR46 395 aa10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 ADD3Q9UEY8 706 aaKnown RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 LIMA1Q9UHB6 759 aaKnown RBP10.93□□□□□ -0.66
IGHV3-54-201ENST00000622166 XDHP47989 1333 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 FANCGO15287 622 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 URI1O94763 535 aaPredicted RBP10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 CALML3P27482 149 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 CASQ1P31415 396 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 HIBADHP31937 336 aaKnown RBP10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 AFMP43652 599 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 ADKP55263 362 aaKnown RBP10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 PTGDRQ13258 359 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 SEMA3FQ13275 785 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 FILIP1LQ4L180 1135 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 ARL6IP4Q66PJ3 421 aaKnown RBP10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 SPTY2D1Q68D10 685 aaPredicted RBP10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 RCSD1Q6JBY9 416 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 PDXDC2PQ6P474 469 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 FAM177A1Q8N128 213 aaPredicted RBP10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 C4orf32Q8N8J7 132 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 IQUBQ8NA54 791 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 ZNF446Q9NWS9 450 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 NARFQ9UHQ1 456 aa10.92□□□□□ -0.66
IGHV3-54-201ENST00000622166 ROBO3Q96MS0 1386 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 hCG_1642624A0A1W2PR95 340 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 LRRC10BA6NIK2 292 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 TEX33O43247 280 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 ATP8B1O43520 1251 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 RPS6KA4O75676 772 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 KIF20AO95235 890 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 KIF5BP33176 963 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 LONP1P36776 959 aaKnown RBP10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 NLRP5P59047 1200 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 SPAG1Q07617 926 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 PTPN21Q16825 1174 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 ARHGAP29Q52LW3 1261 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 NOM1Q5C9Z4 860 aaKnown RBP10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 TBC1D9BQ66K14 1250 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 TOGARAM2Q6ZUX3 1019 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 PPFIBP1Q86W92 1011 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 DGKHQ86XP1 1220 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 CREBRFQ8IUR6 639 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 DAGLBQ8NCG7 672 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 MNS1Q8NEH6 495 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 UBXN4Q92575 508 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 PKNOX2Q96KN3 472 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 CARD6Q9BX69 1037 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 RWDD2AQ9UIY3 292 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 SBF2Q86WG5 1849 aa10.91□□□□□ -0.66
IGHV3-54-201ENST00000622166 A0A0G2JS52 829 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 KCNQ2O43526 872 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 MFAP3LO75121 409 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 ZRANB2O95218 330 aaKnown RBP eCLIP10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 CCDC175P0C221 793 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 CYP2D6P10635 497 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 GNAQP50148 359 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 CLCN6P51797 869 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 GNG11P61952 73 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 TUBB2AQ13885 445 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 GRM4Q14833 912 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 IL17AQ16552 155 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 HSP90AA4PQ58FG1 418 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms