RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 USP17L12C9JPN9 530 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 USP17L21D6R901 530 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
CDH1-214ENST00000621016 SLC51AQ86UW1 340 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
CDH1-214ENST00000621016 TFRCP02786 760 aaKnown RBP12.09□□□□□ -0.47
CDH1-214ENST00000621016 KLRK1P26718 216 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 ETF1P62495 437 aaKnown RBP12.09□□□□□ -0.47
CDH1-214ENST00000621016 CCDC152Q4G0S7 254 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 C3orf67Q6ZVT6 689 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 WDR24Q96S15 920 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
CDH1-214ENST00000621016 COL5A2P05997 1499 aaPredicted RBP12.09□□□□□ -0.47
CDH1-214ENST00000621016 CBFA2T2O43439 604 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 PPP6R2O75170 966 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 HNRNPH1P31943 449 aaKnown RBP12.08□□□□□ -0.48
CDH1-214ENST00000621016 NBPF9Q3BBW0 867 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 RASGRP4Q8TDF6 673 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 SOS2Q07890 1332 aaPredicted RBP12.08□□□□□ -0.48
CDH1-214ENST00000621016 CYP2D6P10635 497 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 IFNAR1P17181 557 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 ZC3H12AQ5D1E8 599 aaKnown RBP12.08□□□□□ -0.48
CDH1-214ENST00000621016 PIK3AP1Q6ZUJ8 805 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 NBPF5PQ86XG9 351 aaPredicted RBP12.08□□□□□ -0.48
CDH1-214ENST00000621016 PLA2G12BQ9BX93 195 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 CNNM2Q9H8M5 875 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 PUF60Q9UHX1 559 aaKnown RBP12.08□□□□□ -0.48
CDH1-214ENST00000621016 HPSEQ9Y251 543 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDH1-214ENST00000621016 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 SOWAHDA6NJG2 315 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 TRIM75PA6NK02 468 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 ECEL1O95672 775 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 ERCC3P19447 782 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 CALRP27797 417 aaKnown RBP12.08□□□□□ -0.48
CDH1-214ENST00000621016 CCNHP51946 323 aaPredicted RBP12.08□□□□□ -0.48
CDH1-214ENST00000621016 WASF1Q92558 559 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 ESR2Q92731 530 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 CD248Q9HCU0 757 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 PPP2R2CQ9Y2T4 447 aa12.08□□□□□ -0.48
CDH1-214ENST00000621016 CCDC196A0A1B0GTZ2 297 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 ERLIN2O94905 339 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 DEXIO95424 95 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 ARMCX6Q7L4S7 300 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 TADA2BQ86TJ2 420 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 CTCFLQ8NI51 663 aaPredicted RBP12.07□□□□□ -0.48
CDH1-214ENST00000621016 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
CDH1-214ENST00000621016 VPS16Q9H269 839 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 TUBE1Q9UJT0 475 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 A0A087X0B3 334 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 LIFRP42702 1097 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 NAP1L1P55209 391 aaKnown RBP12.07□□□□□ -0.48
CDH1-214ENST00000621016 RILPL1Q5EBL4 403 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 CATIPQ7Z7H3 387 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 VSTM4Q8IW00 320 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 ENAHQ8N8S7 591 aaPredicted RBP12.07□□□□□ -0.48
CDH1-214ENST00000621016 CCDC12Q8WUD4 166 aaPredicted RBP12.07□□□□□ -0.48
CDH1-214ENST00000621016 MIEF2Q96C03 454 aa12.07□□□□□ -0.48
CDH1-214ENST00000621016 FBXO2Q9UK22 296 aaPredicted RBP12.07□□□□□ -0.48
CDH1-214ENST00000621016 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
CDH1-214ENST00000621016 IKBKBO14920 756 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 FANCGO15287 622 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 CORO7P57737 925 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 NLRP5P59047 1200 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 DDB1Q16531 1140 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 SGMS1Q86VZ5 419 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 GPKOWQ92917 476 aaPredicted RBP eCLIP12.06□□□□□ -0.48
CDH1-214ENST00000621016 FAXDC2Q96IV6 333 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 PSMD1Q99460 953 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 CPVLQ9H3G5 476 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 PDE11AQ9HCR9 933 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 CCDC87Q9NVE4 849 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 RBM28Q9NW13 759 aaKnown RBP12.06□□□□□ -0.48
CDH1-214ENST00000621016 TBC1D8O95759 1140 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 UIMC1Q96RL1 719 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 LOC102724428A0A0B4J2F2 783 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 ADAMTS3O15072 1205 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 FGFR2P21802 821 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 SIK1P57059 783 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 SWT1Q5T5J6 900 aaKnown RBP12.06□□□□□ -0.48
CDH1-214ENST00000621016 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 PPFIBP1Q86W92 1011 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 FBXL16Q8N461 479 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 CEP89Q96ST8 783 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 LAMA4Q16363 1823 aa12.06□□□□□ -0.48
CDH1-214ENST00000621016 TRPM3Q9HCF6 1732 aaPredicted RBP12.05□□□□□ -0.48
CDH1-214ENST00000621016 ENO4A6NNW6 628 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 XBP1P17861 261 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 PTPREP23469 700 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
CDH1-214ENST00000621016 ACTN3Q08043 901 aaPredicted RBP12.05□□□□□ -0.48
CDH1-214ENST00000621016 PTGDRQ13258 359 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 ITPK1Q13572 414 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 CAVIN4Q5BKX8 364 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms