RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 NOM1Q5C9Z4 860 aaKnown RBP10.4□□□□□ -0.74
RBFOX1-223ENST00000620507 TMTC3Q6ZXV5 915 aa10.4□□□□□ -0.74
RBFOX1-223ENST00000620507 EYA3Q99504 573 aa10.4□□□□□ -0.74
RBFOX1-223ENST00000620507 OSBPL5Q9H0X9 879 aaPredicted RBP10.4□□□□□ -0.74
RBFOX1-223ENST00000620507 ACBD3Q9H3P7 528 aa10.4□□□□□ -0.74
RBFOX1-223ENST00000620507 FGFR1OPO95684 399 aaKnown RBP10.4□□□□□ -0.75
RBFOX1-223ENST00000620507 SPATA1Q5VX52 437 aa10.4□□□□□ -0.75
RBFOX1-223ENST00000620507 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.75
RBFOX1-223ENST00000620507 ENOX1Q8TC92 643 aaKnown RBP10.4□□□□□ -0.75
RBFOX1-223ENST00000620507 PPP1R13BQ96KQ4 1090 aa10.4□□□□□ -0.75
RBFOX1-223ENST00000620507 AFDNP55196 1824 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 XDHP47989 1333 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 KLRF2D3W0D1 207 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 NMT2O60551 498 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 CCNT1O60563 726 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 GOLGA8HP0CJ92 632 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 CYP2D6P10635 497 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 TRAPPC10P48553 1259 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 GOLGA8FQ08AF8 430 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 GOLGA8DPQ0D2H9 430 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 SPA17Q15506 151 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 DIXDC1Q155Q3 683 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 LZTS2Q9BRK4 669 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 RGPD5Q99666 1765 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 MROH7-TTC4A0A0A0MT08 1334 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 FOXN1O15353 648 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 TNNI2P48788 182 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 NONOQ15233 471 aaKnown RBP eCLIP10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 INF2Q27J81 1249 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 METTL16Q86W50 562 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 KRT222Q8N1A0 295 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 ZNF142P52746 1687 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 RIC1Q4ADV7 1423 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 EIF6P56537 245 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 NTRK3Q16288 839 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 DYNLL2Q96FJ2 89 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 TSG101Q99816 390 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 SAMSN1Q9NSI8 373 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 ADAMTSL3P82987 1691 aa10.39□□□□□ -0.75
RBFOX1-223ENST00000620507 USP27XA6NNY8 438 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 BTDP43251 543 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 JAKMIP3Q5VZ66 844 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 KRT25Q7Z3Z0 450 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 VSTM4Q8IW00 320 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 SMYD4Q8IYR2 804 aaPredicted RBP10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 RASGRP4Q8TDF6 673 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 ZNF622Q969S3 477 aaKnown RBP eCLIP10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 NSUN4Q96CB9 384 aaKnown RBP10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 LUC7L2Q9Y383 392 aaKnown RBP10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 CLSTN1O94985 981 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 CACNA2D4Q7Z3S7 1137 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 TBC1D22AQ8WUA7 517 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 NELFBQ8WX92 580 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 CARD6Q9BX69 1037 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 TAB2Q9NYJ8 693 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 TUBE1Q9UJT0 475 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 PPP2R2CQ9Y2T4 447 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 STX10O60499 249 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 CDC25AP30304 524 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 ZNF76P36508 570 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 PTPAQ15257 358 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 ZNF569Q5MCW4 686 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 LINC00116Q8NCU8 138 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 RGS22Q8NE09 1264 aa10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 FBXO2Q9UK22 296 aaPredicted RBP10.38□□□□□ -0.75
RBFOX1-223ENST00000620507 BICDL2A1A5D9 508 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 SMCO2A6NFE2 343 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 TXKP42681 527 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 PDE4DQ08499 809 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 KRT79Q5XKE5 535 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 DGKHQ86XP1 1220 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 DESI2Q9BSY9 194 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 LUC7LQ9NQ29 371 aaKnown RBP10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 OGFRQ9NZT2 677 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 GTPBP6O43824 516 aaPredicted RBP10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 ATP2B4P23634 1241 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 LONP1P36776 959 aaKnown RBP10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 TNNT3P45378 269 aaPredicted RBP10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 GTF2IP78347 998 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 PAGE5Q96GU1 130 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 LRRC27Q9C0I9 530 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 SPATA31A5Q5VU36 1347 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 SPATA31A7Q8IWB4 1347 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 CTAGE9A4FU28 777 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 USP17L3A6NCW0 530 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 USP17L4A6NCW7 530 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 KRT9P35527 623 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 GRAPQ13588 217 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 ERCC6LQ2NKX8 1250 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 USP17L1Q7RTZ2 530 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 GRAPLQ8TC17 118 aaPredicted RBP10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 PCDHA4Q9UN74 947 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
RBFOX1-223ENST00000620507 TNS2Q63HR2 1409 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms