RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CABP4P57796 275 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 GUCY1B3Q02153 619 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 NAA16Q6N069 864 aaPredicted RBP11.65□□□□□ -0.54
VPS11-207ENST00000620429 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 SPATA21Q7Z572 469 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 TTC5Q8N0Z6 440 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 ZNF396Q96N95 335 aaPredicted RBP11.65□□□□□ -0.54
VPS11-207ENST00000620429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS11-207ENST00000620429 KIAA1468Q9P260 1216 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 BIN1O00499 593 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 PPFIA3O75145 1194 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 DDX58O95786 925 aaKnown RBP11.65□□□□□ -0.55
VPS11-207ENST00000620429 KCNA4P22459 653 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 LAMB3Q13751 1172 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 THEMIS2Q5TEJ8 643 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 SLC30A9Q6PML9 568 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 BZW1Q7L1Q6 419 aaKnown RBP11.65□□□□□ -0.55
VPS11-207ENST00000620429 LRP10Q7Z4F1 713 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 NSUN7Q8NE18 718 aaKnown RBP11.65□□□□□ -0.55
VPS11-207ENST00000620429 SMARCC2Q8TAQ2 1214 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 HSD3B7Q9H2F3 369 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 KDM4CQ9H3R0 1056 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 EBF2Q9HAK2 575 aa11.65□□□□□ -0.55
VPS11-207ENST00000620429 CYP21A2P08686 494 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 RPSAP08865 295 aaKnown RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 IBSPP21815 317 aaPredicted RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 NLRP12P59046 1061 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 HHATQ5VTY9 493 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 ARMC3Q5W041 872 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 CCDC47Q96A33 483 aaKnown RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 LLPHQ9BRT6 129 aaKnown RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 TRPC6Q9Y210 931 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 PCDHGC5Q9Y5F6 944 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 NDUFB9Q9Y6M9 179 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 BCL9O00512 1426 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 PTPDC1A2A3K4 754 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 NEURL1BA8MQ27 555 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 ATP5J2-PTCD1G3V325 749 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 PPP1R12BO60237 982 aaPredicted RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 KIF5CO60282 957 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 PTCD1O75127 700 aaKnown RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 CCDC175P0C221 793 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 KARSQ15046 597 aaKnown RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 E2F5Q15329 346 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 TAX1BP1Q86VP1 789 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 CCDC148Q8NFR7 591 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 FMNL2Q96PY5 1086 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 SEC62Q99442 399 aaKnown RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 MRPL44Q9H9J2 332 aaKnown RBP11.64□□□□□ -0.55
VPS11-207ENST00000620429 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 RGL1Q9NZL6 768 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 BLOC1S6Q9UL45 172 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 ZNF232Q9UNY5 417 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 COL15A1P39059 1388 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
VPS11-207ENST00000620429 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 TARSL2A2RTX5 802 aaKnown RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 CTAGE9A4FU28 777 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 CHGBP05060 677 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 USP14P54578 494 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 ATL3Q6DD88 541 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 C6orf89Q6UWU4 347 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 FMR1NBQ8N0W7 255 aaPredicted RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 TRIM58Q8NG06 486 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 PIK3R5Q8WYR1 880 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 MRPS27Q92552 414 aaKnown RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 PLEKHG4BQ96PX9 1271 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 SPAG5Q96R06 1193 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 A0A1B0GVL5 298 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 ZSCAN9O15535 394 aaPredicted RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 EPB41P11171 864 aaKnown RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 LMOD1P29536 600 aaPredicted RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 GCLCP48506 637 aaPredicted RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 ROR2Q01974 943 aaKnown RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 NOA1Q8NC60 698 aaKnown RBP11.63□□□□□ -0.55
VPS11-207ENST00000620429 RASSF8Q8NHQ8 419 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 DPF2Q92785 391 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 SCLT1Q96NL6 688 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 RABEP2Q9H5N1 569 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 BTG4Q9NY30 223 aa11.63□□□□□ -0.55
VPS11-207ENST00000620429 GOLGA6BA6NDN3 693 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 SRRM3A6NNA2 597 aaPredicted RBP11.62□□□□□ -0.55
VPS11-207ENST00000620429 MGRN1O60291 552 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 CTDNEP1O95476 244 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 ATP1A3P13637 1013 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 GOLGA8FQ08AF8 430 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 GOLGA8DPQ0D2H9 430 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 GCKRQ14397 625 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 SF3A1Q15459 793 aaKnown RBP11.62□□□□□ -0.55
VPS11-207ENST00000620429 ANKRD13DQ6ZTN6 518 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 DEFB132Q7Z7B7 95 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 TC2NQ8N9U0 490 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 B4GALNT2Q8NHY0 566 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms