RNA–Protein interactions for RNA: ENST00000619989.1

CCL3L3-203, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3L3, Length 784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-203ENST00000619989 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
CCL3L3-203ENST00000619989 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
CCL3L3-203ENST00000619989 SH2D4AQ9H788 454 aa16.15■□□□□ 0.18
CCL3L3-203ENST00000619989 CLIP2Q9UDT6 1046 aa16.15■□□□□ 0.18
CCL3L3-203ENST00000619989 CTNNA3Q9UI47 895 aa16.15■□□□□ 0.18
CCL3L3-203ENST00000619989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCL3L3-203ENST00000619989 TMX2Q9Y320 296 aa16.15■□□□□ 0.18
CCL3L3-203ENST00000619989 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 SGSM2O43147 1006 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 VCAM1P19320 739 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 KIF22Q14807 665 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 SPICE1Q8N0Z3 855 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 ANKRD13CQ8N6S4 541 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 MCOLN1Q9GZU1 580 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 RPAP3Q9H6T3 665 aaPredicted RBP16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 ADGRA2Q96PE1 1338 aa16.14■□□□□ 0.17
CCL3L3-203ENST00000619989 PTH1RQ03431 593 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 IMMTQ16891 758 aaKnown RBP16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 KIAA1755Q5JYT7 1200 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 AKNAD1Q5T1N1 836 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 CEP95Q96GE4 821 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 VCPKMTQ9H867 229 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 MTMR4Q9NYA4 1195 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 NYAP2Q9P242 653 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 LOC285556D6RIA3 1793 aa16.13■□□□□ 0.17
CCL3L3-203ENST00000619989 IGKV6D-41A0A0C4DH26 115 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 ORC4O43929 436 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 FGRP09769 529 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 BCRP11274 1271 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 LACTBP83111 547 aaPredicted RBP16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 CAP1Q01518 475 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 CATSPERGQ6ZRH7 1159 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 TANGO6Q9C0B7 1094 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 ARHGAP39Q9C0H5 1083 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 NBPF3Q9H094 633 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 EFCC1Q9HA90 598 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 GOPCQ9HD26 462 aa16.12■□□□□ 0.17
CCL3L3-203ENST00000619989 NMT2O60551 498 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 REC8O95072 547 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 FMNL1O95466 1100 aaPredicted RBP16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 TTLL1O95922 423 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 PSMC4P43686 418 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 GCLCP48506 637 aaPredicted RBP16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 HERVK_113P62684 666 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 ARHGEF6Q15052 776 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 OTOP1Q7RTM1 612 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 LPAR1Q92633 364 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 ESYT1Q9BSJ8 1104 aa16.11■□□□□ 0.17
CCL3L3-203ENST00000619989 PEX10O60683 326 aa16.1■□□□□ 0.17
CCL3L3-203ENST00000619989 PAGR1Q9BTK6 254 aa16.1■□□□□ 0.17
CCL3L3-203ENST00000619989 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
CCL3L3-203ENST00000619989 IL17RBQ9NRM6 502 aa16.1■□□□□ 0.17
CCL3L3-203ENST00000619989 STX8Q9UNK0 236 aa16.1■□□□□ 0.17
CCL3L3-203ENST00000619989 F5H6K3 240 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 WDR46O15213 610 aaKnown RBP16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 PCP11498 1178 aaKnown RBP16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 CTGFP29279 349 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 KLRC3Q07444 240 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 COG2Q14746 738 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 PKN2Q16513 984 aaKnown RBP16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 FAM110CQ1W6H9 321 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 LRRC47Q8N1G4 583 aaKnown RBP16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 MKL1Q969V6 931 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 CHMP4CQ96CF2 233 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 RBPJLQ9UBG7 517 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 NEDD4P46934 1319 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 PLIN4Q96Q06 1357 aa16.09■□□□□ 0.17
CCL3L3-203ENST00000619989 FLOT1O75955 427 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 FAM83BQ5T0W9 1011 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 NKX2-3Q8TAU0 364 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 ESR2Q92731 530 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 TRIM47Q96LD4 638 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 NUP88Q99567 741 aaPredicted RBP16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 HOXC10Q9NYD6 342 aa16.08■□□□□ 0.16
CCL3L3-203ENST00000619989 GREB1LQ9C091 1923 aaPredicted RBP16.07■□□□□ 0.16
CCL3L3-203ENST00000619989 B4E1Z4 1266 aa16.07■□□□□ 0.16
CCL3L3-203ENST00000619989 KDM4AO75164 1064 aa16.07■□□□□ 0.16
CCL3L3-203ENST00000619989 NDUFB10O96000 172 aa16.07■□□□□ 0.16
CCL3L3-203ENST00000619989 FCGRTP55899 365 aa16.07■□□□□ 0.16
CCL3L3-203ENST00000619989 Q3C1V9 767 aa16.07■□□□□ 0.16
CCL3L3-203ENST00000619989 RNF20Q5VTR2 975 aa16.07■□□□□ 0.16
CCL3L3-203ENST00000619989 FBXO46Q6PJ61 603 aaPredicted RBP16.07■□□□□ 0.16
CCL3L3-203ENST00000619989 GPRC5AQ8NFJ5 357 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms