RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 FBXO18Q8NFZ0 1043 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 NIP7Q9Y221 180 aaKnown RBP eCLIP3.38□□□□□ -1.87
LPP-221ENST00000618621 FAM169AQ9Y6X4 670 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 RTL9Q8NET4 1388 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 MYL1P05976 194 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 UBE3CQ15386 1083 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 SND1Q7KZF4 910 aaKnown RBP eCLIP3.38□□□□□ -1.87
LPP-221ENST00000618621 COL17A1Q9UMD9 1497 aaPredicted RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 RASSF2P50749 326 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 PPP1R7Q15435 360 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ZNF579Q8NAF0 562 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 FANCBQ8NB91 859 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 VTI1AQ96AJ9 217 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ZBTB12Q9Y330 459 aaPredicted RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 DDAH1O94760 285 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 MTMR3Q13615 1198 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 DPCR1Q3MIW9 517 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 C10orf76Q5T2E6 689 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 NOSTRINQ8IVI9 506 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 UBLCP1Q8WVY7 318 aaPredicted RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 EDC3Q96F86 508 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 CUEDC2Q9H467 287 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 SLC52A2Q9HAB3 445 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 TFCP2L1Q9NZI6 479 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ATP10AO60312 1499 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 CCNT1O60563 726 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 ENOX1Q8TC92 643 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 DHTKD1Q96HY7 919 aaPredicted RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 IFIH1Q9BYX4 1025 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 YY1AP1Q9H869 796 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 PLA2R1Q13018 1463 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 SEC31AO94979 1220 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 KRT25Q7Z3Z0 450 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ZBTB38Q8NAP3 1195 aaPredicted RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 LPIN2Q92539 896 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ADAM21Q9UKJ8 722 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 KCNQ4P56696 695 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 E2F4Q16254 413 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ZNF790Q6PG37 636 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 SELENOSQ9BQE4 189 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 F8W031 263 aaPredicted RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 ATP1A3P13637 1013 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 CLNS1AP54105 237 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 NAA25Q14CX7 972 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 SEL1L2Q5TEA6 688 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 IQCGQ9H095 443 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 IKBKBO14920 756 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 TRIM66O15016 1216 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 FGAP02671 866 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 TCP1P17987 556 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 MCTP2Q6DN12 878 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 TAOK1Q7L7X3 1001 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 RNF10Q8N5U6 811 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 TRIM58Q8NG06 486 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 VCXQ9H320 206 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 RABEP2Q9H5N1 569 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 BUB1BO60566 1050 aaPredicted RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 TADA3O75528 432 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 CCDC38Q502W7 563 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 MYCT1Q8N699 235 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 GSDMAQ96QA5 445 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ATG3Q9NT62 314 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.38□□□□□ -1.87
LPP-221ENST00000618621 HECW1Q76N89 1606 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 CIAO1O76071 339 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 PHLDB3Q6NSJ2 640 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 CNOT10Q9H9A5 744 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 JAG2Q9Y219 1238 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 IL2RBP14784 551 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 BPIFB4P59827 614 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 KLHL30Q0D2K2 578 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 DDX23Q9BUQ8 820 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 PSTPIP2Q9H939 334 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 QTRT2Q9H974 415 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 USH1CQ9Y6N9 552 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 PTPRTO14522 1441 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 KDM5BQ9UGL1 1544 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CCT6AP40227 531 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 IFT88Q13099 833 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 RESTQ13127 1097 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ICE2Q659A1 982 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ATL2Q8NHH9 583 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CLIC6Q96NY7 704 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 FNBP1Q96RU3 617 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 DESI2Q9BSY9 194 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MRPL44Q9H9J2 332 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 ST7Q9NRC1 585 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 KRIT1O00522 736 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 PFKFB1P16118 471 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MKRN3Q13064 507 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 LETM2Q2VYF4 491 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MSANTD4Q8NCY6 345 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 RBM17Q96I25 401 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 MAGEF1Q9HAY2 307 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CLIC4Q9Y696 253 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ABCC2Q92887 1545 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 SPDYE3A6NKU9 549 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 LDHBP07195 334 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 SCRN1Q12765 414 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms