RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FAAP100Q0VG06 881 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 RASGRF1Q13972 1273 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 TMEM240Q5SV17 173 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 CCDC102BQ68D86 513 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 RNF180Q86T96 592 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 MAGEB6Q8N7X4 407 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 IL27Q8NEV9 243 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 DNAJC18Q9H819 358 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 MSRAQ9UJ68 235 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 ADAMTS5Q9UNA0 930 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 SPDYE16A6NNV3 312 aaPredicted RBP5.67□□□□□ -1.5
SNCA-213ENST00000618500 PLCB2Q00722 1185 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 FOXK2Q01167 660 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 PUS10Q3MIT2 529 aaKnown RBP5.67□□□□□ -1.5
SNCA-213ENST00000618500 SPDYE1Q8NFV5 336 aaPredicted RBP5.67□□□□□ -1.5
SNCA-213ENST00000618500 FAM161BQ96MY7 647 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 PBX4Q9BYU1 374 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 IL23AQ9NPF7 189 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 GPR108Q9NPR9 543 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 IQSEC3Q9UPP2 1182 aaPredicted RBP5.67□□□□□ -1.5
SNCA-213ENST00000618500 SZT2Q5T011 3432 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 BRCA2P51587 3418 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 F6X3S4 739 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 CD4P01730 458 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 RFC2P35250 354 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 PHKA1P46020 1223 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 SH3RF1Q7Z6J0 888 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 ZSCAN29Q8IWY8 852 aaPredicted RBP5.67□□□□□ -1.5
SNCA-213ENST00000618500 TMEM199Q8N511 208 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 MRPL50Q8N5N7 158 aaKnown RBP5.67□□□□□ -1.5
SNCA-213ENST00000618500 NUP133Q8WUM0 1156 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 CEP126Q9P2H0 1117 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 IVNS1ABPQ9Y6Y0 642 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 MYH7P12883 1935 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 FLT1P17948 1338 aa5.67□□□□□ -1.5
SNCA-213ENST00000618500 UQCRFS1P1P0C7P4 283 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 ITGB8P26012 769 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 TLE2Q04725 743 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 ALDH1L2Q3SY69 923 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 MAMDC4Q6UXC1 1216 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 CCDC129Q6ZRS4 1044 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 MAML3Q96JK9 1138 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 USP44Q9H0E7 712 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 COL6A3P12111 3177 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 DCDC2CA8MYV0 355 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 BAG3O95817 575 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 RARBP10826 455 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 AKR1A1P14550 325 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 EXOSC9Q06265 439 aaKnown RBP5.66□□□□□ -1.5
SNCA-213ENST00000618500 ADGRE1Q14246 886 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 ZNF792Q3KQV3 632 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 GJC2Q5T442 439 aaPredicted RBP5.66□□□□□ -1.5
SNCA-213ENST00000618500 PHOSPHO2Q8TCD6 241 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 C11orf16Q9NQ32 467 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 BTBD7Q9P203 1132 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 A0A0U1RQG5 324 aaPredicted RBP5.66□□□□□ -1.5
SNCA-213ENST00000618500 TLR3O15455 904 aaKnown RBP5.66□□□□□ -1.5
SNCA-213ENST00000618500 CABYRO75952 493 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 HLA-DOAP06340 250 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 ZNF865P0CJ78 1059 aaPredicted RBP5.66□□□□□ -1.5
SNCA-213ENST00000618500 RAG1P15918 1043 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 VCAM1P19320 739 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 ADORA2AP29274 412 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 ADCYAP1R1P41586 468 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 TEX11Q8IYF3 940 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 HOXC10Q9NYD6 342 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 LCTP09848 1927 aa5.66□□□□□ -1.5
SNCA-213ENST00000618500 ATG2AQ2TAZ0 1938 aa5.65□□□□□ -1.5
SNCA-213ENST00000618500 JAG1P78504 1218 aa5.65□□□□□ -1.5
SNCA-213ENST00000618500 CCAR1Q8IX12 1150 aaKnown RBP5.65□□□□□ -1.5
SNCA-213ENST00000618500 SLC44A5Q8NCS7 719 aa5.65□□□□□ -1.5
SNCA-213ENST00000618500 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.65□□□□□ -1.5
SNCA-213ENST00000618500 NOL10Q9BSC4 688 aaKnown RBP5.65□□□□□ -1.5
SNCA-213ENST00000618500 SPATC1LQ9H0A9 340 aa5.65□□□□□ -1.5
SNCA-213ENST00000618500 XPNPEP3Q9NQH7 507 aa5.65□□□□□ -1.5
SNCA-213ENST00000618500 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.65□□□□□ -1.5
SNCA-213ENST00000618500 SYNPO2Q9UMS6 1093 aa5.65□□□□□ -1.5
SNCA-213ENST00000618500 CT47B1P0C2W7 299 aaPredicted RBP5.65□□□□□ -1.51
SNCA-213ENST00000618500 GJA9P57773 515 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 PICALMQ13492 652 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 COL19A1Q14993 1142 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 C16orf59Q7L2K0 433 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 RIOX2Q8IUF8 465 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 FAM126BQ8IXS8 530 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 SPATA5Q8NB90 893 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 PCSK9Q8NBP7 692 aaKnown RBP5.65□□□□□ -1.51
SNCA-213ENST00000618500 PRRX2Q99811 253 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 MOV10L1Q9BXT6 1211 aaKnown RBP5.65□□□□□ -1.51
SNCA-213ENST00000618500 PRDM5Q9NQX1 630 aaPredicted RBP5.65□□□□□ -1.51
SNCA-213ENST00000618500 TMEM39AQ9NV64 488 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 RAPGEFL1Q9UHV5 662 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 SYNRGQ9UMZ2 1314 aa5.65□□□□□ -1.51
SNCA-213ENST00000618500 ATP2A1O14983 1001 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 COBLO75128 1261 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 DUSP11O75319 330 aaKnown RBP5.64□□□□□ -1.51
SNCA-213ENST00000618500 NUBP1P53384 320 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 ACLYP53396 1101 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 ATN1P54259 1190 aaPredicted RBP5.64□□□□□ -1.51
SNCA-213ENST00000618500 PKN1Q16512 942 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 POTEGQ6S5H5 508 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms