RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CALM2P0DP24 149 aa20.18■□□□□ 0.82
CNOT3-209ENST00000617930 CALM3P0DP25 149 aa20.18■□□□□ 0.82
CNOT3-209ENST00000617930 FAM200AQ8TCP9 573 aa20.18■□□□□ 0.82
CNOT3-209ENST00000617930 NOL10Q9BSC4 688 aaKnown RBP20.18■□□□□ 0.82
CNOT3-209ENST00000617930 PHF20Q9BVI0 1012 aa20.18■□□□□ 0.82
CNOT3-209ENST00000617930 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.18■□□□□ 0.82
CNOT3-209ENST00000617930 RAD17O75943 681 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 CMA1P23946 247 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 CRKP46108 304 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
CNOT3-209ENST00000617930 DGKHQ86XP1 1220 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 STAG2Q8N3U4 1231 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 LARGE2Q8N3Y3 721 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 DNAJC25Q9H1X3 360 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 MKNK2Q9HBH9 465 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.17■□□□□ 0.82
CNOT3-209ENST00000617930 PPP6R2O75170 966 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 ADCY5O95622 1261 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 PFKFB1P16118 471 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 CDK8P49336 464 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 GRIN1Q05586 938 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 CDC42EP5Q6NZY7 148 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 RASGRP2Q7LDG7 609 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 BCS1LQ9Y276 419 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 PCDHB6Q9Y5E3 794 aa20.17■□□□□ 0.82
CNOT3-209ENST00000617930 WNT7AO00755 349 aa20.16■□□□□ 0.82
CNOT3-209ENST00000617930 KINO60870 393 aaKnown RBP20.16■□□□□ 0.82
CNOT3-209ENST00000617930 SLURP2P0DP57 97 aa20.16■□□□□ 0.82
CNOT3-209ENST00000617930 HHIPL2Q6UWX4 724 aa20.16■□□□□ 0.82
CNOT3-209ENST00000617930 C11orf57Q6ZUT1 292 aaPredicted RBP20.16■□□□□ 0.82
CNOT3-209ENST00000617930 C16orf86Q6ZW13 317 aa20.16■□□□□ 0.82
CNOT3-209ENST00000617930 TCP11L1Q9NUJ3 509 aa20.16■□□□□ 0.82
CNOT3-209ENST00000617930 HPSEQ9Y251 543 aa20.16■□□□□ 0.82
CNOT3-209ENST00000617930 PSMD14O00487 310 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 NFIAQ12857 509 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 SASS6Q6UVJ0 657 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 UBE2Q2Q8WVN8 375 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 ZNF202O95125 648 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 CACNB3P54284 484 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 RASSF7Q02833 373 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 GRIPAP1Q4V328 841 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 PNMA1Q8ND90 353 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 CTCFLQ8NI51 663 aaPredicted RBP20.15■□□□□ 0.82
CNOT3-209ENST00000617930 PIBF1Q8WXW3 757 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 TNFRSF25Q93038 417 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 GMLQ99445 158 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 CABP5Q9NP86 173 aa20.15■□□□□ 0.82
CNOT3-209ENST00000617930 ZBTB12Q9Y330 459 aaPredicted RBP20.15■□□□□ 0.82
CNOT3-209ENST00000617930 CTAGE5O15320 804 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 TSPY3P0CV98 308 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 TSPY8P0CW00 308 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 PICALMQ13492 652 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 SAFBQ15424 915 aaKnown RBP eCLIP20.14■□□□□ 0.81
CNOT3-209ENST00000617930 CERS3Q8IU89 383 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 ZFPM1Q8IX07 1006 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 SLF2Q8IX21 1173 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 TEKT1Q969V4 418 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 TMEM47Q9BQJ4 181 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 KAT14Q9H8E8 782 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 MAD2L2Q9UI95 211 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 SIPA1L1O43166 1804 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 ARFGEF1Q9Y6D6 1849 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 PLCG2P16885 1265 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 ZNF444Q8N0Y2 327 aaPredicted RBP20.14■□□□□ 0.81
CNOT3-209ENST00000617930 ZDHHC15Q96MV8 337 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 USP40Q9NVE5 1235 aa20.14■□□□□ 0.81
CNOT3-209ENST00000617930 FAM237AA0A1B0GTK4 181 aa20.13■□□□□ 0.81
CNOT3-209ENST00000617930 AKAP17AQ02040 695 aaKnown RBP20.13■□□□□ 0.81
CNOT3-209ENST00000617930 SPECC1Q5M775 1068 aa20.13■□□□□ 0.81
CNOT3-209ENST00000617930 CYTH3O43739 400 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 VIL1P09327 827 aaKnown RBP20.12■□□□□ 0.81
CNOT3-209ENST00000617930 ZNF165P49910 485 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 IQCB1Q15051 598 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 RESP18Q5W5W9 173 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 TAOK3Q9H2K8 898 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 FBXO2Q9UK22 296 aaPredicted RBP20.12■□□□□ 0.81
CNOT3-209ENST00000617930 UQCRHLA0A096LP55 91 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 UQCRHP07919 91 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 GRM4Q14833 912 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 RILPL1Q5EBL4 403 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 SOGA3Q5TF21 947 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 RSBN1LQ6PCB5 846 aaPredicted RBP20.12■□□□□ 0.81
CNOT3-209ENST00000617930 AMOTL1Q8IY63 956 aa20.12■□□□□ 0.81
CNOT3-209ENST00000617930 BAZ2BQ9UIF8 2168 aaKnown RBP20.11■□□□□ 0.81
CNOT3-209ENST00000617930 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 PLCB2Q00722 1185 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 GABPAQ06546 454 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 CXCL9Q07325 125 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 PFKFB3Q16875 520 aaPredicted RBP20.11■□□□□ 0.81
CNOT3-209ENST00000617930 GLIPR1L2Q4G1C9 344 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 TYW1BQ6NUM6 668 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 NEDD1Q8NHV4 660 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 SDF4Q9BRK5 362 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 STX8Q9UNK0 236 aa20.11■□□□□ 0.81
CNOT3-209ENST00000617930 SHTN1A0MZ66 631 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 SCG2P13521 617 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 MRIQ9BWK5 157 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 KIAA1468Q9P260 1216 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 ZNRF3Q9ULT6 936 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 CUTAO60888 179 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms