RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 CCNI2Q6ZMN8 369 aaPredicted RBP8.2□□□□□ -1.1
PDE6A-205ENST00000617647 BRAPQ7Z569 592 aa8.2□□□□□ -1.1
PDE6A-205ENST00000617647 ARHGEF25Q86VW2 580 aa8.2□□□□□ -1.1
PDE6A-205ENST00000617647 TEX9Q8N6V9 391 aa8.2□□□□□ -1.1
PDE6A-205ENST00000617647 RBM41Q96IZ5 413 aaKnown RBP8.2□□□□□ -1.1
PDE6A-205ENST00000617647 SEC16BQ96JE7 1060 aa8.2□□□□□ -1.1
PDE6A-205ENST00000617647 MMS19Q96T76 1030 aa8.2□□□□□ -1.1
PDE6A-205ENST00000617647 LSG1Q9H089 658 aaKnown RBP8.2□□□□□ -1.1
PDE6A-205ENST00000617647 C9orf78Q9NZ63 289 aaPredicted RBP8.2□□□□□ -1.1
PDE6A-205ENST00000617647 CTNND1O60716 968 aaKnown RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 SUPT3HO75486 399 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 FESP07332 822 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 PFKFB1P16118 471 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 MRPS35P82673 323 aaKnown RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 PDE1CQ14123 709 aaPredicted RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 MSL3Q8N5Y2 521 aaKnown RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 RHPN1Q8TCX5 695 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 C17orf50Q8WW18 174 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 KIFC2Q96AC6 838 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 OPTNQ96CV9 577 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 TM6SF1Q9BZW5 370 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 VPS16Q9H269 839 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 CD2APQ9Y5K6 639 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 MADDQ8WXG6 1647 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 ZFXP17010 805 aaPredicted RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 AMPHP49418 695 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 GUCY2DQ02846 1103 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 KLC1Q07866 573 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 CUL4BQ13620 913 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 KBTBD12Q3ZCT8 623 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 ANKRD23Q86SG2 305 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 OR8K1Q8NGG5 319 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 TAOK3Q9H2K8 898 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 BOLA2Q9H3K6 86 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 STIM2Q9P246 746 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 HMGB1P1B2RPK0 211 aaPredicted RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 SLC27A2O14975 620 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 FAM200BP0CF97 657 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 GCLCP48506 637 aaPredicted RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 SEPT2Q15019 361 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 IFI16Q16666 785 aaKnown RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 ZNF827Q17R98 1081 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 ANKRD20A8PQ5CZ79 823 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 VSIG1Q86XK7 387 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 RRP36Q96EU6 259 aaKnown RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 UNC45AQ9H3U1 944 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 DDX21Q9NR30 783 aaKnown RBP eCLIP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 CWC25Q9NXE8 425 aaPredicted RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 CHMP2BQ9UQN3 213 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 RTN2O75298 545 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 DNAJC8O75937 253 aaPredicted RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 CCND1P24385 295 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 RAD23BP54727 409 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 SH3BGRP55822 239 aaPredicted RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 BEND3Q5T5X7 828 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 GRAMD4Q6IC98 578 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 EMBQ6PCB8 327 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 INTS8Q75QN2 995 aaKnown RBP8.19□□□□□ -1.1
PDE6A-205ENST00000617647 CCDC80Q76M96 950 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 MORC4Q8TE76 937 aa8.19□□□□□ -1.1
PDE6A-205ENST00000617647 ERCC6L2Q5T890 1561 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 RASSF9O75901 435 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 AFMP43652 599 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 SERPINB4P48594 390 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 FNTAP49354 379 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 COG7P83436 770 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 SLC5A9Q2M3M2 681 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 OLFML2BQ68BL8 750 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 NANOGNBQ7Z5D8 188 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 RALYLQ86SE5 291 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 MAB21L3Q8N8X9 362 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 KLHDC4Q8TBB5 520 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 P3H4Q92791 437 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 NAF1Q96HR8 494 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 HAUS4Q9H6D7 363 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 INTUQ9ULD6 942 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 WDR7Q9Y4E6 1490 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 PRPF6O94906 941 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 TRIM21P19474 475 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 IFNAR2P48551 515 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 ELF3P78545 371 aaPredicted RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 UBXN1Q04323 297 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 NMIQ13287 307 aaPredicted RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 UBE4AQ14139 1066 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 TBC1D25Q3MII6 688 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 SLC44A4Q53GD3 710 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 TMEM132EQ6IEE7 984 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 YTHDF3Q7Z739 585 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 ZC3H18Q86VM9 953 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 EVI5LQ96CN4 794 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 PLEKHG4BQ96PX9 1271 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 RAB3IPQ96QF0 476 aaPredicted RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 ELAC2Q9BQ52 826 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 BPIFA3Q9BQP9 254 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 NCOA5Q9HCD5 579 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 ECHDC1Q9NTX5 307 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 DNAAF2Q9NVR5 837 aaKnown RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 GALNT8Q9NY28 637 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms