RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 NOSTRINQ8IVI9 506 aa9□□□□□ -0.97
NEK3-207ENST00000617054 KCTD17Q8N5Z5 321 aa9□□□□□ -0.97
NEK3-207ENST00000617054 FSIP1Q8NA03 581 aa9□□□□□ -0.97
NEK3-207ENST00000617054 RASGRP4Q8TDF6 673 aa9□□□□□ -0.97
NEK3-207ENST00000617054 NUP62CLQ9H1M0 184 aa9□□□□□ -0.97
NEK3-207ENST00000617054 TNMDQ9H2S6 317 aa9□□□□□ -0.97
NEK3-207ENST00000617054 CLIP2Q9UDT6 1046 aa9□□□□□ -0.97
NEK3-207ENST00000617054 SERPINB13Q9UIV8 391 aa9□□□□□ -0.97
NEK3-207ENST00000617054 PCDHB6Q9Y5E3 794 aa9□□□□□ -0.97
NEK3-207ENST00000617054 CNTNAP5Q8WYK1 1306 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 COL4A5P29400 1685 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 USP17L5A8MUK1 530 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 U2AF2P26368 475 aaKnown RBP eCLIP8.99□□□□□ -0.972e-7■■□□□ 13
NEK3-207ENST00000617054 SNW1Q13573 536 aaKnown RBP8.99□□□□□ -0.97
NEK3-207ENST00000617054 CCDC93Q567U6 631 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 BRAPQ7Z569 592 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 DGKHQ86XP1 1220 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 CDAN1Q8IWY9 1227 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 ZDHHC15Q96MV8 337 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 MTA3Q9BTC8 594 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 RNF26Q9BY78 433 aaPredicted RBP8.99□□□□□ -0.97
NEK3-207ENST00000617054 DNAJC18Q9H819 358 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 ISY1Q9ULR0 285 aaKnown RBP8.99□□□□□ -0.97
NEK3-207ENST00000617054 BCS1LQ9Y276 419 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 NAV1Q8NEY1 1877 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 DDX60LQ5H9U9 1706 aaKnown RBP8.99□□□□□ -0.97
NEK3-207ENST00000617054 LAMB1P07942 1786 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 SNED1Q8TER0 1413 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 ZMYND10O75800 440 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 DDAH1O94760 285 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 TYW1BQ6NUM6 668 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 ECM29Q5VYK3 1845 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 PRPF3O43395 683 aaKnown RBP8.99□□□□□ -0.97
NEK3-207ENST00000617054 GDF11O95390 407 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 SHMT1P34896 483 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 MLLT3P42568 568 aaPredicted RBP8.99□□□□□ -0.97
NEK3-207ENST00000617054 GABPAQ06546 454 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 SAFBQ15424 915 aaKnown RBP eCLIP8.99□□□□□ -0.97
NEK3-207ENST00000617054 MAP3K14Q99558 947 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 PIM2Q9P1W9 311 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.99□□□□□ -0.97
NEK3-207ENST00000617054 SUGT1Q9Y2Z0 365 aa8.99□□□□□ -0.97
NEK3-207ENST00000617054 C10orf71Q711Q0 1435 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 STK36Q9NRP7 1315 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 RGPD3A6NKT7 1758 aaPredicted RBP8.98□□□□□ -0.97
NEK3-207ENST00000617054 RGPD4Q7Z3J3 1758 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 ROBO3Q96MS0 1386 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 KLRF2D3W0D1 207 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 CALM1P0DP23 149 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 CALM2P0DP24 149 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 CALM3P0DP25 149 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 ISM2Q6H9L7 571 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 TMED8Q6PL24 325 aaPredicted RBP8.98□□□□□ -0.97
NEK3-207ENST00000617054 NEDD1Q8NHV4 660 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 WASF1Q92558 559 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 POLR3EQ9NVU0 708 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 RBM28Q9NW13 759 aaKnown RBP8.98□□□□□ -0.97
NEK3-207ENST00000617054 MYH6P13533 1939 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 NLRP5P59047 1200 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 GPCPD1Q9NPB8 672 aa8.98□□□□□ -0.97
NEK3-207ENST00000617054 NID2Q14112 1375 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 SCG2P13521 617 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 SLC16A2P36021 539 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 JAG1P78504 1218 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 SLC39A14Q15043 492 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 PTPAQ15257 358 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 NPY5RQ15761 445 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 MAP3K11Q16584 847 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 HEATR3Q7Z4Q2 680 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 RTKN2Q8IZC4 609 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 SLC16A10Q8TF71 515 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 PHF20Q9BVI0 1012 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 VEZTQ9HBM0 779 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 ZNF287Q9HBT7 754 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 MTMR4Q9NYA4 1195 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 EGFRP00533 1210 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 POLD1P28340 1107 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 NUBP1P53384 320 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 ZNF174Q15697 407 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 DALRD3Q5D0E6 543 aaKnown RBP8.97□□□□□ -0.97
NEK3-207ENST00000617054 AXDND1Q5T1B0 1012 aaPredicted RBP8.97□□□□□ -0.97
NEK3-207ENST00000617054 ADALQ6DHV7 355 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 TTBK2Q6IQ55 1244 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 PIK3AP1Q6ZUJ8 805 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 KCTD1Q719H9 257 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 NLGN2Q8NFZ4 835 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 MYH15Q9Y2K3 1946 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 KIF5BP33176 963 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 RASSF7Q02833 373 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 CXCL9Q07325 125 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 RRP1BQ14684 758 aaKnown RBP8.97□□□□□ -0.97
NEK3-207ENST00000617054 SHC4Q6S5L8 630 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 CCDC73Q6ZRK6 1079 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 USP49Q70CQ1 688 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 MIGA2Q7L4E1 593 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 CERS3Q8IU89 383 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 ENGASEQ8NFI3 743 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 FUCA2Q9BTY2 467 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 CLSTN2Q9H4D0 955 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 TCP11L1Q9NUJ3 509 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms