RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 ANGEL2Q5VTE6 544 aaKnown RBP18.52■□□□□ 0.56
DDB2-212ENST00000617022 LARP1BQ659C4 914 aaKnown RBP18.52■□□□□ 0.56
DDB2-212ENST00000617022 CMTR1Q8N1G2 835 aaKnown RBP18.52■□□□□ 0.56
DDB2-212ENST00000617022 PNMA1Q8ND90 353 aa18.52■□□□□ 0.56
DDB2-212ENST00000617022 PGAP2Q9UHJ9 254 aa18.52■□□□□ 0.56
DDB2-212ENST00000617022 DDAH1O94760 285 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 BRD1O95696 1058 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 FDPSP14324 419 aaKnown RBP18.51■□□□□ 0.55
DDB2-212ENST00000617022 LMOD1P29536 600 aaPredicted RBP18.51■□□□□ 0.55
DDB2-212ENST00000617022 NTRK3Q16288 839 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 MIGA2Q7L4E1 593 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 PHKBQ93100 1093 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 HERC5Q9UII4 1024 aaKnown RBP18.51■□□□□ 0.55
DDB2-212ENST00000617022 MTMR7Q9Y216 660 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 IGKV6D-41A0A0C4DH26 115 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 MCTP1Q6DN14 999 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 CCDC17Q96LX7 622 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 MTMR4Q9NYA4 1195 aa18.51■□□□□ 0.55
DDB2-212ENST00000617022 CALM1P0DP23 149 aa18.5■□□□□ 0.55
DDB2-212ENST00000617022 CALM2P0DP24 149 aa18.5■□□□□ 0.55
DDB2-212ENST00000617022 CALM3P0DP25 149 aa18.5■□□□□ 0.55
DDB2-212ENST00000617022 FOSBP53539 338 aa18.5■□□□□ 0.55
DDB2-212ENST00000617022 RRP1BQ14684 758 aaKnown RBP18.5■□□□□ 0.55
DDB2-212ENST00000617022 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
DDB2-212ENST00000617022 CPLX2Q6PUV4 134 aaKnown RBP18.5■□□□□ 0.55
DDB2-212ENST00000617022 CCDC82Q8N4S0 544 aa18.5■□□□□ 0.55
DDB2-212ENST00000617022 VPS37CA5D8V6 355 aaPredicted RBP18.49■□□□□ 0.55
DDB2-212ENST00000617022 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 TEPSINQ96N21 525 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 DEFB129Q9H1M3 183 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 GGA3Q9NZ52 723 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 ORC3Q9UBD5 711 aaPredicted RBP18.49■□□□□ 0.55
DDB2-212ENST00000617022 TAOK2Q9UL54 1235 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 WDR33Q9C0J8 1336 aaKnown RBP18.49■□□□□ 0.55
DDB2-212ENST00000617022 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
DDB2-212ENST00000617022 CCDC196A0A1B0GTZ2 297 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 CDKL5O76039 1030 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 PDCP20941 246 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 GTF2F1P35269 517 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDB2-212ENST00000617022 NOVP48745 357 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 JAG1P78504 1218 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 LRSAM1Q6UWE0 723 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 RASGRP2Q7LDG7 609 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 CTCFLQ8NI51 663 aaPredicted RBP18.49■□□□□ 0.55
DDB2-212ENST00000617022 MTMR6Q9Y217 621 aa18.49■□□□□ 0.55
DDB2-212ENST00000617022 LETM1O95202 739 aaPredicted RBP18.48■□□□□ 0.55
DDB2-212ENST00000617022 TOP1P11387 765 aaKnown RBP18.48■□□□□ 0.55
DDB2-212ENST00000617022 ABCB5Q2M3G0 1257 aa18.48■□□□□ 0.55
DDB2-212ENST00000617022 LRRC47Q8N1G4 583 aaKnown RBP18.48■□□□□ 0.55
DDB2-212ENST00000617022 ADARB2Q9NS39 739 aaKnown RBP18.48■□□□□ 0.55
DDB2-212ENST00000617022 CLIP2Q9UDT6 1046 aa18.48■□□□□ 0.55
DDB2-212ENST00000617022 UBE2Q2LH0YL09 131 aa18.48■□□□□ 0.55
DDB2-212ENST00000617022 PLEKHA8P1O95397 391 aa18.48■□□□□ 0.55
DDB2-212ENST00000617022 IFNAR1P17181 557 aa18.48■□□□□ 0.55
DDB2-212ENST00000617022 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
DDB2-212ENST00000617022 SLC26A6Q9BXS9 759 aa18.48■□□□□ 0.55
DDB2-212ENST00000617022 TTLL1O95922 423 aa18.47■□□□□ 0.55
DDB2-212ENST00000617022 GH2P01242 217 aa18.47■□□□□ 0.55
DDB2-212ENST00000617022 ZSCAN22P10073 491 aaPredicted RBP18.47■□□□□ 0.55
DDB2-212ENST00000617022 SEPT2Q15019 361 aa18.47■□□□□ 0.55
DDB2-212ENST00000617022 PPP2R5BQ15173 497 aa18.47■□□□□ 0.55
DDB2-212ENST00000617022 CDC37L1Q7L3B6 337 aa18.47■□□□□ 0.55
DDB2-212ENST00000617022 RBM28Q9NW13 759 aaKnown RBP18.47■□□□□ 0.55
DDB2-212ENST00000617022 GUCY1A2P33402 732 aa18.47■□□□□ 0.55
DDB2-212ENST00000617022 TMEM179Q6ZVK1 233 aa18.47■□□□□ 0.55
DDB2-212ENST00000617022 APOBEC3FQ8IUX4 373 aaKnown RBP18.47■□□□□ 0.55
DDB2-212ENST00000617022 KIF3AQ9Y496 699 aa18.47■□□□□ 0.55
DDB2-212ENST00000617022 TBC1D12O60347 775 aa18.46■□□□□ 0.55
DDB2-212ENST00000617022 SSRP1Q08945 709 aaKnown RBP18.46■□□□□ 0.55
DDB2-212ENST00000617022 PRAMEF18Q5VWM3 479 aa18.46■□□□□ 0.55
DDB2-212ENST00000617022 NBPF11Q86T75 865 aa18.46■□□□□ 0.55
DDB2-212ENST00000617022 CHAMP1Q96JM3 812 aa18.46■□□□□ 0.55
DDB2-212ENST00000617022 AIFM3Q96NN9 605 aa18.46■□□□□ 0.55
DDB2-212ENST00000617022 ARID3AQ99856 593 aa18.46■□□□□ 0.55
DDB2-212ENST00000617022 H3BQV1 296 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
DDB2-212ENST00000617022 GUCY1B3Q02153 619 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 FOXD4L6Q3SYB3 417 aaPredicted RBP18.45■□□□□ 0.54
DDB2-212ENST00000617022 NBPF12Q5TAG4 269 aaPredicted RBP18.45■□□□□ 0.54
DDB2-212ENST00000617022 IFFO2Q5TF58 517 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 FOXD4L3Q6VB84 417 aaPredicted RBP18.45■□□□□ 0.54
DDB2-212ENST00000617022 TMTC3Q6ZXV5 915 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 STAG2Q8N3U4 1231 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 L3MBTL3Q96JM7 780 aaPredicted RBP18.45■□□□□ 0.54
DDB2-212ENST00000617022 ZC3H4Q9UPT8 1303 aaKnown RBP18.45■□□□□ 0.54
DDB2-212ENST00000617022 GLTPD2A6NH11 291 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 EEF2P13639 858 aaKnown RBP18.45■□□□□ 0.54
DDB2-212ENST00000617022 KIF5BP33176 963 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 GRM4Q14833 912 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 KANSL2Q9H9L4 492 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 GJB4Q9NTQ9 266 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 MAD2L2Q9UI95 211 aa18.45■□□□□ 0.54
DDB2-212ENST00000617022 F13A1P00488 732 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 GOLGA8HP0CJ92 632 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 MAP3K10Q02779 954 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 ICA1Q05084 483 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 FUT2Q10981 343 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 PPP4R3BQ5MIZ7 849 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 OTUD7BQ6GQQ9 843 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms