RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 NARFQ9UHQ1 456 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 BTDP43251 543 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 PLCD1P51178 756 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 TMTC3Q6ZXV5 915 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 ZNF804AQ7Z570 1209 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
PRKD1-209ENST00000616995 FBXL16Q8N461 479 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 MLKLQ8NB16 471 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 TIGD1Q96MW7 591 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 IMPACTQ9P2X3 320 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 A0A087X0B3 334 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 TROAPQ12815 778 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 CCDC96Q2M329 555 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
PRKD1-209ENST00000616995 PUF60Q9UHX1 559 aaKnown RBP16.44■□□□□ 0.22
PRKD1-209ENST00000616995 HPSEQ9Y251 543 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 SRCAPQ6ZRS2 3230 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 ADAMTS3O15072 1205 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 SEC23AQ15436 765 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 ENOX2Q16206 610 aaKnown RBP16.44■□□□□ 0.22
PRKD1-209ENST00000616995 DTHD1Q6ZMT9 781 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 PAGE5Q96GU1 130 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 GDAQ9Y2T3 454 aa16.44■□□□□ 0.22
PRKD1-209ENST00000616995 N4BP2Q86UW6 1770 aaPredicted RBP16.44■□□□□ 0.22
PRKD1-209ENST00000616995 CCNT1O60563 726 aaKnown RBP16.43■□□□□ 0.22
PRKD1-209ENST00000616995 CUL4BQ13620 913 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 SF3B3Q15393 1217 aaKnown RBP16.43■□□□□ 0.22
PRKD1-209ENST00000616995 PKN1Q16512 942 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 SPECC1LQ69YQ0 1117 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 CDK5RAP3Q96JB5 506 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 IKBKBO14920 756 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 PRPF3O43395 683 aaKnown RBP16.43■□□□□ 0.22
PRKD1-209ENST00000616995 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 TCP10Q12799 353 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.43■□□□□ 0.22
PRKD1-209ENST00000616995 SOWAHDA6NJG2 315 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 TUBE1Q9UJT0 475 aa16.43■□□□□ 0.22
PRKD1-209ENST00000616995 THRAP3Q9Y2W1 955 aaKnown RBP16.43■□□□□ 0.22
PRKD1-209ENST00000616995 FAM170AA1A519 330 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
PRKD1-209ENST00000616995 SLURP2P0DP57 97 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 TXKP42681 527 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 MSL1Q68DK7 614 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 ZNF622Q969S3 477 aaKnown RBP eCLIP16.42■□□□□ 0.22
PRKD1-209ENST00000616995 EYA3Q99504 573 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 TOGARAM2Q6ZUX3 1019 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 VSTM4Q8IW00 320 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 MXD3Q9BW11 206 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 BRIP1Q9BX63 1249 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 ATP8A2Q9NTI2 1148 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 MAGEC2Q9UBF1 373 aaPredicted RBP16.42■□□□□ 0.22
PRKD1-209ENST00000616995 ARPP21Q9UBL0 812 aaPredicted RBP16.42■□□□□ 0.22
PRKD1-209ENST00000616995 ERICH4A6NGS2 130 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 LDHCP07864 332 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 UBXN1Q04323 297 aa16.42■□□□□ 0.22
PRKD1-209ENST00000616995 STK36Q9NRP7 1315 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 TRIM49BA6NDI0 452 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 TNNI2P48788 182 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 ASIC1P78348 528 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 RAD51AP2Q09MP3 1159 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 WDR66Q8TBY9 1149 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 PPP2R2CQ9Y2T4 447 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 TRMT1LQ7Z2T5 733 aaKnown RBP16.41■□□□□ 0.22
PRKD1-209ENST00000616995 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 GGA1Q9UJY5 639 aa16.41■□□□□ 0.22
PRKD1-209ENST00000616995 FAM196BA6NMK8 535 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 AKR1B15C9JRZ8 316 aaPredicted RBP16.4■□□□□ 0.22
PRKD1-209ENST00000616995 SLFN14P0C7P3 912 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
PRKD1-209ENST00000616995 CASP14P31944 242 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 TECP42680 631 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 CACNB3P54284 484 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 RBL2Q08999 1139 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 DYMQ7RTS9 669 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 OSBPL5Q9H0X9 879 aaPredicted RBP16.4■□□□□ 0.22
PRKD1-209ENST00000616995 CGNQ9P2M7 1197 aaKnown RBP16.4■□□□□ 0.22
PRKD1-209ENST00000616995 CRYBG1Q9Y4K1 1723 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 TRIM37O94972 964 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 NELFBQ8WX92 580 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 TANGO6Q9C0B7 1094 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 TCP11L1Q9NUJ3 509 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 DNA2P51530 1060 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 ETF1P62495 437 aaKnown RBP16.4■□□□□ 0.22
PRKD1-209ENST00000616995 ST5P78524 1137 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 HINFPQ9BQA5 517 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 PHF20Q9BVI0 1012 aa16.4■□□□□ 0.22
PRKD1-209ENST00000616995 ZNF569Q5MCW4 686 aa16.39■□□□□ 0.21
PRKD1-209ENST00000616995 COA7Q96BR5 231 aa16.39■□□□□ 0.21
PRKD1-209ENST00000616995 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
PRKD1-209ENST00000616995 SMCO2A6NFE2 343 aa16.39■□□□□ 0.21
PRKD1-209ENST00000616995 KIF2AO00139 706 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms