RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 SNHG28P0DPA3 235 aa17.7■□□□□ 0.42
CBWD1-225ENST00000616944 INPP5BP32019 993 aa17.7■□□□□ 0.42
CBWD1-225ENST00000616944 GRM4Q14833 912 aa17.7■□□□□ 0.42
CBWD1-225ENST00000616944 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
CBWD1-225ENST00000616944 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.7■□□□□ 0.42
CBWD1-225ENST00000616944 SYNPO2Q9UMS6 1093 aa17.7■□□□□ 0.42
CBWD1-225ENST00000616944 FZD1Q9UP38 647 aa17.7■□□□□ 0.42
CBWD1-225ENST00000616944 FUT2Q10981 343 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 RASGRP2Q7LDG7 609 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 LDHDQ86WU2 507 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 LRRC47Q8N1G4 583 aaKnown RBP17.69■□□□□ 0.42
CBWD1-225ENST00000616944 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.69■□□□□ 0.42
CBWD1-225ENST00000616944 WRNIP1Q96S55 665 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 RBM28Q9NW13 759 aaKnown RBP17.69■□□□□ 0.42
CBWD1-225ENST00000616944 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 CCDC196A0A1B0GTZ2 297 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 A0A1W2PRG0 241 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 USP2O75604 605 aaPredicted RBP17.69■□□□□ 0.42
CBWD1-225ENST00000616944 IFNAR1P17181 557 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 GJB2P29033 226 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 MAD2L2Q9UI95 211 aa17.69■□□□□ 0.42
CBWD1-225ENST00000616944 PARP14Q460N5 1801 aa17.68■□□□□ 0.42
CBWD1-225ENST00000616944 PDHBP11177 359 aa17.68■□□□□ 0.42
CBWD1-225ENST00000616944 FDPSP14324 419 aaKnown RBP17.68■□□□□ 0.42
CBWD1-225ENST00000616944 NOL9Q5SY16 702 aaKnown RBP17.68■□□□□ 0.42
CBWD1-225ENST00000616944 MAP1SQ66K74 1059 aaPredicted RBP17.68■□□□□ 0.42
CBWD1-225ENST00000616944 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
CBWD1-225ENST00000616944 NBPF11Q86T75 865 aa17.68■□□□□ 0.42
CBWD1-225ENST00000616944 SCYL3Q8IZE3 742 aa17.68■□□□□ 0.42
CBWD1-225ENST00000616944 PALM3A6NDB9 673 aaPredicted RBP17.67■□□□□ 0.42
CBWD1-225ENST00000616944 CPLX1O14810 134 aa17.67■□□□□ 0.42
CBWD1-225ENST00000616944 PLEKHA8P1O95397 391 aa17.67■□□□□ 0.42
CBWD1-225ENST00000616944 HMGN5P82970 282 aaKnown RBP17.67■□□□□ 0.42
CBWD1-225ENST00000616944 GMCL1P1Q8NEA9 526 aa17.67■□□□□ 0.42
CBWD1-225ENST00000616944 CTCFLQ8NI51 663 aaPredicted RBP17.67■□□□□ 0.42
CBWD1-225ENST00000616944 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
CBWD1-225ENST00000616944 CLEC11AQ9Y240 323 aa17.67■□□□□ 0.42
CBWD1-225ENST00000616944 TMX2Q9Y320 296 aa17.67■□□□□ 0.42
CBWD1-225ENST00000616944 STK36Q9NRP7 1315 aa17.67■□□□□ 0.42
CBWD1-225ENST00000616944 CDKL5O76039 1030 aa17.66■□□□□ 0.42
CBWD1-225ENST00000616944 KIF5BP33176 963 aa17.66■□□□□ 0.42
CBWD1-225ENST00000616944 ECE1P42892 770 aa17.66■□□□□ 0.42
CBWD1-225ENST00000616944 ATP2B2Q01814 1243 aa17.66■□□□□ 0.42
CBWD1-225ENST00000616944 MAP3K11Q16584 847 aa17.66■□□□□ 0.42
CBWD1-225ENST00000616944 STAG2Q8N3U4 1231 aa17.66■□□□□ 0.42
CBWD1-225ENST00000616944 ACER1Q8TDN7 264 aa17.66■□□□□ 0.42
CBWD1-225ENST00000616944 ZKSCAN4Q969J2 545 aaPredicted RBP17.66■□□□□ 0.42
CBWD1-225ENST00000616944 CNTNAP5Q8WYK1 1306 aa17.66■□□□□ 0.42
CBWD1-225ENST00000616944 USP17L5A8MUK1 530 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 PPP1R12BO60237 982 aaPredicted RBP17.65■□□□□ 0.42
CBWD1-225ENST00000616944 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 CPLX2Q6PUV4 134 aaKnown RBP17.65■□□□□ 0.42
CBWD1-225ENST00000616944 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.65■□□□□ 0.42
CBWD1-225ENST00000616944 CCDC84Q86UT8 332 aaPredicted RBP17.65■□□□□ 0.42
CBWD1-225ENST00000616944 CMTR1Q8N1G2 835 aaKnown RBP17.65■□□□□ 0.42
CBWD1-225ENST00000616944 SRBD1Q8N5C6 995 aaKnown RBP17.65■□□□□ 0.42
CBWD1-225ENST00000616944 PHKBQ93100 1093 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 ARHGEF10LQ9HCE6 1279 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 PPFIA3O75145 1194 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 FMNL1O95466 1100 aaPredicted RBP17.65■□□□□ 0.42
CBWD1-225ENST00000616944 PARP1P09874 1014 aaKnown RBP17.65■□□□□ 0.42
CBWD1-225ENST00000616944 NF2P35240 595 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 ZNF543Q08ER8 600 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 PKP1Q13835 747 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 USP17L2Q6R6M4 530 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 DDX11Q96FC9 970 aa17.65■□□□□ 0.42
CBWD1-225ENST00000616944 MYH15Q9Y2K3 1946 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 F5H6K3 240 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 TRAF5O00463 557 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 PTPRAP18433 802 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 KLRC3Q07444 240 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 PRKG1Q13976 671 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 VGLL4Q14135 290 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 ASPRV1Q53RT3 343 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 GMCL1Q96IK5 515 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 RNF26Q9BY78 433 aaPredicted RBP17.64■□□□□ 0.41
CBWD1-225ENST00000616944 CHMP5Q9NZZ3 219 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 ORC3Q9UBD5 711 aaPredicted RBP17.64■□□□□ 0.41
CBWD1-225ENST00000616944 MTMR7Q9Y216 660 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 SNCAIPQ9Y6H5 919 aa17.64■□□□□ 0.41
CBWD1-225ENST00000616944 LOC285556D6RIA3 1793 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 NDUFB10O96000 172 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 GOLGA8HP0CJ92 632 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 SYT1P21579 422 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 GNAQP50148 359 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 KIAA1755Q5JYT7 1200 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 DCAF4Q8WV16 495 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 WDR18Q9BV38 432 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 SH2D4AQ9H788 454 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 RLFQ13129 1914 aa17.63■□□□□ 0.41
CBWD1-225ENST00000616944 KLRF2D3W0D1 207 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 UBE2Q2LH0YL09 131 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 CYTH3O43739 400 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 SMARCA1P28370 1054 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 IREB2P48200 963 aaKnown RBP17.62■□□□□ 0.41
CBWD1-225ENST00000616944 MAP3K9P80192 1104 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 FMR1Q06787 632 aaKnown RBP eCLIP17.62■□□□□ 0.41
CBWD1-225ENST00000616944 GPATCH4Q5T3I0 446 aaKnown RBP17.62■□□□□ 0.41
CBWD1-225ENST00000616944 SLFN13Q68D06 897 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms