RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PTPREP23469 700 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 MCAMP43121 646 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 BIRC2Q13490 618 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 RASGRP2Q7LDG7 609 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 ZNF622Q969S3 477 aaKnown RBP eCLIP14.82□□□□□ -0.047e-14■■■□□ 18.5
MSH6-214ENST00000616033 GDAQ9Y2T3 454 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 SAR1BQ9Y6B6 198 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 ERICH2A1L162 156 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 GOLGA6BA6NDN3 693 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 PLBD2Q8NHP8 589 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 HNRNPLLQ8WVV9 542 aaKnown RBP14.82□□□□□ -0.04
MSH6-214ENST00000616033 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
MSH6-214ENST00000616033 FAM169AQ9Y6X4 670 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 MYH8P13535 1937 aa14.82□□□□□ -0.04
MSH6-214ENST00000616033 EXOC5O00471 708 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 IDEP14735 1019 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 EARS2Q5JPH6 523 aaKnown RBP14.81□□□□□ -0.04
MSH6-214ENST00000616033 CYP26C1Q6V0L0 522 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 SH2D3CQ8N5H7 860 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 JAKMIP2Q96AA8 810 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 HPCAL4Q9UM19 191 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 CAPN7Q9Y6W3 813 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 NBPF26B4DH59 902 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 WNT7AO00755 349 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 ACTN4O43707 911 aaKnown RBP14.81□□□□□ -0.04
MSH6-214ENST00000616033 IPO7O95373 1038 aaKnown RBP14.81□□□□□ -0.04
MSH6-214ENST00000616033 MMP1P03956 469 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 WHAMMP3Q1A5X7 153 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 NBPF10Q6P3W6 841 aaKnown RBP14.81□□□□□ -0.04
MSH6-214ENST00000616033 CCDC91Q7Z6B0 441 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 NBPF15Q8N660 670 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 PAGE5Q96GU1 130 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 SELENOOQ9BVL4 669 aa14.81□□□□□ -0.04
MSH6-214ENST00000616033 PIH1D3Q9NQM4 214 aaKnown RBP14.81□□□□□ -0.04
MSH6-214ENST00000616033 FAM217BQ9NTX9 383 aaPredicted RBP14.81□□□□□ -0.04
MSH6-214ENST00000616033 MBD4O95243 580 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 PDCLQ13371 301 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 ENOX2Q16206 610 aaKnown RBP14.8□□□□□ -0.04
MSH6-214ENST00000616033 TMTC1Q8IUR5 882 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 HDAC7Q8WUI4 952 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 PRDM11Q9NQV5 511 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 TRIM75PA6NK02 468 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 MCM7P33993 719 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 IFIT5Q13325 482 aaKnown RBP14.8□□□□□ -0.04
MSH6-214ENST00000616033 WTAPQ15007 396 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 TOM1L2Q6ZVM7 507 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 MAGEB6Q8N7X4 407 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 KAT2BQ92831 832 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 JPH2Q9BR39 696 aaPredicted RBP14.8□□□□□ -0.04
MSH6-214ENST00000616033 LY9Q9HBG7 655 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 PIK3C2AO00443 1686 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 ZNF335Q9H4Z2 1342 aaPredicted RBP14.8□□□□□ -0.04
MSH6-214ENST00000616033 ARHGAP25P42331 645 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 NTRK3Q16288 839 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 RPAINQ86UA6 219 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 MED4Q9NPJ6 270 aa14.8□□□□□ -0.04
MSH6-214ENST00000616033 TTC26A0AVF1 554 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 SHTN1A0MZ66 631 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 NDUFA10O95299 355 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 USP5P45974 858 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 MMP14P50281 582 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 COPB1P53618 953 aaKnown RBP14.79□□□□□ -0.04
MSH6-214ENST00000616033 CUL4BQ13620 913 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 RILPL1Q5EBL4 403 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 MFSD6Q6ZSS7 791 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 NELFBQ8WX92 580 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.79□□□□□ -0.04
MSH6-214ENST00000616033 ABCC6O95255 1503 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 KCNJ18B7U540 433 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 MYO1FO00160 1098 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 NEBLO76041 1014 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 TRIM21P19474 475 aaKnown RBP14.79□□□□□ -0.04
MSH6-214ENST00000616033 INPP5BP32019 993 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 KLK7P49862 253 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 KCNJ12Q14500 433 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 PTPROQ16827 1216 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 KRT26Q7Z3Y9 468 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 TBC1D2BQ9UPU7 963 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 V9GY48 417 aaPredicted RBP14.79□□□□□ -0.04
MSH6-214ENST00000616033 NDUFAB1O14561 156 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 ZFYP08048 801 aaPredicted RBP14.79□□□□□ -0.04
MSH6-214ENST00000616033 PHKG2P15735 406 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 PHKA1P46020 1223 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 USP14P54578 494 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 ANKRD18AQ8IVF6 992 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 IGDCC4Q8TDY8 1250 aa14.79□□□□□ -0.04
MSH6-214ENST00000616033 LUC7L2Q9Y383 392 aaKnown RBP14.79□□□□□ -0.04
MSH6-214ENST00000616033 CCDC96Q2M329 555 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 EFCAB13Q8IY85 973 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 IQUBQ8NA54 791 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 IFT81Q8WYA0 676 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 CTAGE1Q96RT6 745 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 CAPS2Q9BXY5 557 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 H7C1W4 665 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 IRAK1P51617 712 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 CASP7P55210 303 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 IFNL2Q8IZJ0 200 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 UBAC1Q9BSL1 405 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 NAA15Q9BXJ9 866 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9114.9 ms