RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 FAM200AQ8TCP9 573 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 CNNM2Q9H8M5 875 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 ARPP21Q9UBL0 812 aaPredicted RBP11.42□□□□□ -0.58
GGA3-221ENST00000614198 ATP6V1DQ9Y5K8 247 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 DDX60LQ5H9U9 1706 aaKnown RBP11.42□□□□□ -0.58
GGA3-221ENST00000614198 TIAM2Q8IVF5 1701 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 CXCL9Q07325 125 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 FBXO38Q6PIJ6 1188 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 DLK2Q6UY11 383 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 ZSCAN29Q8IWY8 852 aaPredicted RBP11.42□□□□□ -0.58
GGA3-221ENST00000614198 EFCC1Q9HA90 598 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 FAM198AQ9UFP1 575 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 KCNJ14Q9UNX9 436 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 FZD1Q9UP38 647 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 ZNF646O15015 1829 aaPredicted RBP11.42□□□□□ -0.58
GGA3-221ENST00000614198 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 LUZP1Q86V48 1076 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 ZNF215Q9UL58 517 aaPredicted RBP11.42□□□□□ -0.58
GGA3-221ENST00000614198 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
GGA3-221ENST00000614198 NBPF9Q3BBW0 867 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.41□□□□□ -0.58
GGA3-221ENST00000614198 ERO1AQ96HE7 468 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 TMEM87BQ96K49 555 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 FHDC1Q9C0D6 1143 aaPredicted RBP11.41□□□□□ -0.58
GGA3-221ENST00000614198 DNAJC18Q9H819 358 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 ERICH2A1L162 156 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 TSPY3P0CV98 308 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 TSPY8P0CW00 308 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 JAG1P78504 1218 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 FAM163AQ96GL9 167 aaPredicted RBP11.41□□□□□ -0.58
GGA3-221ENST00000614198 RNF41Q9H4P4 317 aaPredicted RBP11.41□□□□□ -0.58
GGA3-221ENST00000614198 ST7Q9NRC1 585 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
GGA3-221ENST00000614198 RAD21O60216 631 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 AKR1B1P15121 316 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 IARSP41252 1262 aaKnown RBP11.41□□□□□ -0.58
GGA3-221ENST00000614198 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
GGA3-221ENST00000614198 FANCBQ8NB91 859 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 GJA3Q9Y6H8 435 aa11.41□□□□□ -0.58
GGA3-221ENST00000614198 LAMB1P07942 1786 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 PDE4BQ07343 736 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 BMS1Q14692 1282 aaKnown RBP11.4□□□□□ -0.58
GGA3-221ENST00000614198 SBK1Q52WX2 424 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 SGMS1Q86VZ5 419 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 RTKN2Q8IZC4 609 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
GGA3-221ENST00000614198 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.4□□□□□ -0.58
GGA3-221ENST00000614198 FGRP09769 529 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 LIFRP42702 1097 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 ATP2B2Q01814 1243 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 RAD51AP2Q09MP3 1159 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 TROAPQ12815 778 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
GGA3-221ENST00000614198 PRAMEF18Q5VWM3 479 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 CEP95Q96GE4 821 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 TAOK3Q9H2K8 898 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 VEZTQ9HBM0 779 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 ZNF446Q9NWS9 450 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.58
GGA3-221ENST00000614198 MPHOSPH10O00566 681 aaKnown RBP11.4□□□□□ -0.59
GGA3-221ENST00000614198 GDF11O95390 407 aa11.4□□□□□ -0.59
GGA3-221ENST00000614198 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.59
GGA3-221ENST00000614198 TGFB2P61812 414 aa11.4□□□□□ -0.59
GGA3-221ENST00000614198 SLC35G1Q2M3R5 365 aa11.4□□□□□ -0.59
GGA3-221ENST00000614198 MIGA2Q7L4E1 593 aa11.4□□□□□ -0.59
GGA3-221ENST00000614198 SAMD7Q7Z3H4 446 aa11.4□□□□□ -0.59
GGA3-221ENST00000614198 CCDC84Q86UT8 332 aaPredicted RBP11.4□□□□□ -0.59
GGA3-221ENST00000614198 IQCA1Q86XH1 822 aa11.4□□□□□ -0.59
GGA3-221ENST00000614198 PLA2G4DQ86XP0 818 aa11.4□□□□□ -0.59
GGA3-221ENST00000614198 ZNF444Q8N0Y2 327 aaPredicted RBP11.4□□□□□ -0.59
GGA3-221ENST00000614198 LRRC47Q8N1G4 583 aaKnown RBP11.4□□□□□ -0.59
GGA3-221ENST00000614198 FBXL16Q8N461 479 aa11.4□□□□□ -0.59
GGA3-221ENST00000614198 ZNF75DP51815 510 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 RTN1Q16799 776 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 FILIP1Q7Z7B0 1213 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 TTC6Q86TZ1 520 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 OSBPL5Q9H0X9 879 aaPredicted RBP11.39□□□□□ -0.59
GGA3-221ENST00000614198 YY1AP1Q9H869 796 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 KIF13BQ9NQT8 1826 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 RESTQ13127 1097 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 SART3Q15020 963 aaKnown RBP11.39□□□□□ -0.59
GGA3-221ENST00000614198 RSBN1LQ6PCB5 846 aaPredicted RBP11.39□□□□□ -0.59
GGA3-221ENST00000614198 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
GGA3-221ENST00000614198 BICD2Q8TD16 824 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 ZDHHC15Q96MV8 337 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 PSMD1Q99460 953 aa11.39□□□□□ -0.59
GGA3-221ENST00000614198 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
GGA3-221ENST00000614198 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 ELF2Q15723 593 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 CACTINQ8WUQ7 758 aaKnown RBP11.38□□□□□ -0.59
GGA3-221ENST00000614198 C8orf76Q96K31 380 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 TMEM39BQ9GZU3 492 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 TNMDQ9H2S6 317 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 VPS54Q9P1Q0 977 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms