RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 SLC4A8Q2Y0W8 1093 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 COL23A1Q86Y22 540 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 PDCL2Q8N4E4 241 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 MLKLQ8NB16 471 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 ATP8A2Q9NTI2 1148 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
TUBD1-216ENST00000613721 ABCB7O75027 752 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 BMP15O95972 392 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 SARSP49591 514 aaKnown RBP13.65□□□□□ -0.22
TUBD1-216ENST00000613721 GPSM2P81274 684 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 GRAPQ13588 217 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 SAMD1Q6SPF0 538 aaPredicted RBP13.65□□□□□ -0.22
TUBD1-216ENST00000613721 VSTM4Q8IW00 320 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 GRAPLQ8TC17 118 aaPredicted RBP13.65□□□□□ -0.22
TUBD1-216ENST00000613721 CCDC34Q96HJ3 373 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 MORC3Q14149 939 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 EARS2Q5JPH6 523 aaKnown RBP13.65□□□□□ -0.22
TUBD1-216ENST00000613721 TMED8Q6PL24 325 aaPredicted RBP13.65□□□□□ -0.22
TUBD1-216ENST00000613721 USP49Q70CQ1 688 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 GRAMD1CQ8IYS0 662 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 KIF18AQ8NI77 898 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 PPP1R13BQ96KQ4 1090 aa13.65□□□□□ -0.22
TUBD1-216ENST00000613721 IRS2Q9Y4H2 1338 aa13.65□□□□□ -0.23
TUBD1-216ENST00000613721 TOP1P11387 765 aaKnown RBP13.64□□□□□ -0.23
TUBD1-216ENST00000613721 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
TUBD1-216ENST00000613721 NMT2O60551 498 aa13.64□□□□□ -0.23
TUBD1-216ENST00000613721 SBK1Q52WX2 424 aa13.64□□□□□ -0.23
TUBD1-216ENST00000613721 FAM47AQ5JRC9 791 aa13.64□□□□□ -0.23
TUBD1-216ENST00000613721 FERMT2Q96AC1 680 aa13.64□□□□□ -0.23
TUBD1-216ENST00000613721 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
TUBD1-216ENST00000613721 NFE2L3Q9Y4A8 694 aa13.64□□□□□ -0.23
TUBD1-216ENST00000613721 TMEM232C9JQI7 657 aa13.63□□□□□ -0.23
TUBD1-216ENST00000613721 FMR1Q06787 632 aaKnown RBP eCLIP13.63□□□□□ -0.23
TUBD1-216ENST00000613721 NPY5RQ15761 445 aa13.63□□□□□ -0.23
TUBD1-216ENST00000613721 DZIP1Q86YF9 867 aaKnown RBP13.63□□□□□ -0.23
TUBD1-216ENST00000613721 SRBD1Q8N5C6 995 aaKnown RBP13.63□□□□□ -0.23
TUBD1-216ENST00000613721 SPATA20Q8TB22 786 aa13.63□□□□□ -0.23
TUBD1-216ENST00000613721 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
TUBD1-216ENST00000613721 TNFRSF25Q93038 417 aa13.63□□□□□ -0.23
TUBD1-216ENST00000613721 DHX58Q96C10 678 aa13.63□□□□□ -0.23
TUBD1-216ENST00000613721 BAZ2BQ9UIF8 2168 aaKnown RBP13.63□□□□□ -0.23
TUBD1-216ENST00000613721 TSPY2A6NKD2 308 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 CCP110O43303 1012 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 CYP2D6P10635 497 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 ST5P78524 1137 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
TUBD1-216ENST00000613721 ZNF772Q68DY9 489 aaPredicted RBP13.62□□□□□ -0.23
TUBD1-216ENST00000613721 POTEAQ6S8J7 498 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 A0A087X0B3 334 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 SCG2P13521 617 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 ZNF18P17022 549 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 HSP90AA4PQ58FG1 418 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 TRMT44Q8IYL2 757 aaKnown RBP13.62□□□□□ -0.23
TUBD1-216ENST00000613721 SYMPKQ92797 1274 aaKnown RBP13.62□□□□□ -0.23
TUBD1-216ENST00000613721 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 EPSTI1Q96J88 318 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 INTS13Q9NVM9 706 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 MCM9Q9NXL9 1143 aa13.62□□□□□ -0.23
TUBD1-216ENST00000613721 WNT7AO00755 349 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 ZBTB22O15209 634 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 UFL1O94874 794 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 TUBB4AP04350 444 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 CDK11BP21127 795 aaKnown RBP13.61□□□□□ -0.23
TUBD1-216ENST00000613721 RXRBP28702 533 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 PLCD1P51178 756 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 TMX1Q9H3N1 280 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 NAV1Q8NEY1 1877 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
TUBD1-216ENST00000613721 KIF5BP33176 963 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 NLRP5P59047 1200 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 ATP2C1P98194 919 aaPredicted RBP13.61□□□□□ -0.23
TUBD1-216ENST00000613721 ZNF174Q15697 407 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
TUBD1-216ENST00000613721 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
TUBD1-216ENST00000613721 NOM1Q5C9Z4 860 aaKnown RBP13.61□□□□□ -0.23
TUBD1-216ENST00000613721 ZNF215Q9UL58 517 aaPredicted RBP13.61□□□□□ -0.23
TUBD1-216ENST00000613721 AFMP43652 599 aa13.6□□□□□ -0.23
TUBD1-216ENST00000613721 NAA30Q147X3 362 aaPredicted RBP13.6□□□□□ -0.23
TUBD1-216ENST00000613721 DIXDC1Q155Q3 683 aa13.6□□□□□ -0.23
TUBD1-216ENST00000613721 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
TUBD1-216ENST00000613721 RCSD1Q6JBY9 416 aa13.6□□□□□ -0.23
TUBD1-216ENST00000613721 SH3RF1Q7Z6J0 888 aa13.6□□□□□ -0.23
TUBD1-216ENST00000613721 ANKRD31Q8N7Z5 1873 aa13.6□□□□□ -0.23
TUBD1-216ENST00000613721 VWA3AA6NCI4 1184 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 USP17L8P0C7I0 530 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 TRAPPC10P48553 1259 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 NT5C2P49902 561 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 PTGDRQ13258 359 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 PTPN21Q16825 1174 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 SYT10Q6XYQ8 523 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 PIK3AP1Q6ZUJ8 805 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 FCHSD1Q86WN1 690 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
TUBD1-216ENST00000613721 ERO1AQ96HE7 468 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms