RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 GOLGA8AA7E2F4 631 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 KIF2AO00139 706 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 C2CD2LO14523 706 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 S100BP04271 92 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 PYGLP06737 847 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 RPSAP08865 295 aaKnown RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 COL8A1P27658 744 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 S100A5P33763 92 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 TSPAN7P41732 249 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 CCT8P50990 548 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 TUBA1BP68363 451 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 USP4Q13107 963 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 IKQ13123 557 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 LAMB3Q13751 1172 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 LRRC23Q53EV4 343 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 SH2D4BQ5SQS7 431 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 NAA16Q6N069 864 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 CAVIN1Q6NZI2 390 aaKnown RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 TUBA1AQ71U36 451 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 SMG6Q86US8 1419 aaKnown RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 WDR63Q8IWG1 891 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 PGBD3Q8N328 593 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCL16-206ENST00000613642 CCDC150Q8NCX0 1101 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 ZNF397Q8NF99 534 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 RASSF8Q8NHQ8 419 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 B4GALNT2Q8NHY0 566 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 SAAL1Q96ER3 474 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 ZNF496Q96IT1 587 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 EPSTI1Q96J88 318 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 TANGO6Q9C0B7 1094 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 BRD8Q9H0E9 1235 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 SLKQ9H2G2 1235 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 CRISPLD1Q9H336 500 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 RUBCNLQ9H714 662 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 AS3MTQ9HBK9 375 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 BATF3Q9NR55 127 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 BIN2Q9UBW5 565 aaPredicted RBP6.29□□□□□ -1.4
CCL16-206ENST00000613642 CROTQ9UKG9 612 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 CHIC2Q9UKJ5 165 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 USTQ9Y2C2 406 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 KIF21AQ7Z4S6 1674 aa6.29□□□□□ -1.4
CCL16-206ENST00000613642 A0A087WUV0 522 aaPredicted RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 A0A1W2PRQ8 180 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 TMEM232C9JQI7 657 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 EIF3FO00303 357 aaPredicted RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 CPLX1O14810 134 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 P4HA2O15460 535 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 AHCYL1O43865 530 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 BNIP3LO60238 219 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 DIAPH1O60610 1272 aaKnown RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 RTN2O75298 545 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 PRPF40AO75400 957 aaKnown RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 LDHAP00338 332 aaKnown RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 HSPA1AP0DMV8 641 aaKnown RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 HSPA1BP0DMV9 641 aaKnown RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 SKIP12755 728 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 ZNF16P17020 682 aaPredicted RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 GCKP35557 465 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 CASP2P42575 452 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 SLC8A3P57103 927 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 CORO7P57737 925 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 ARPC4P59998 168 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 CTAG1AP78358 180 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 HNRNPUQ00839 825 aaKnown RBP eCLIP6.28□□□□□ -1.4
CCL16-206ENST00000613642 NUCB1Q02818 461 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 DDR1Q08345 913 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 FKBP5Q13451 457 aaPredicted RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 PPP2R5BQ15173 497 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 RASA2Q15283 850 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 EFHC2Q5JST6 749 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 XP32Q5T750 250 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 RCSD1Q6JBY9 416 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 ZCCHC8Q6NZY4 707 aaKnown RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 PDXDC1Q6P996 788 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 OLFML1Q6UWY5 402 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 ATF7IPQ6VMQ6 1270 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 LINC00114Q6XXX2 140 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 TTC39CQ8N584 583 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 APPL2Q8NEU8 664 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 RHBDD1Q8TEB9 315 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.28□□□□□ -1.4
CCL16-206ENST00000613642 JARID2Q92833 1246 aaPredicted RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 PAWRQ96IZ0 340 aaKnown RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 CCDC114Q96M63 670 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 SPAG5Q96R06 1193 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 OSBPL9Q96SU4 736 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 OSBPL10Q9BXB5 764 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 ETNK1Q9HBU6 452 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 COG6Q9Y2V7 657 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 NOSIPQ9Y314 301 aaKnown RBP6.28□□□□□ -1.4
CCL16-206ENST00000613642 TMED5Q9Y3A6 229 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 TTLL3Q9Y4R7 772 aa6.28□□□□□ -1.4
CCL16-206ENST00000613642 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.28□□□□□ -1.4
CCL16-206ENST00000613642 BAZ1AQ9NRL2 1556 aaPredicted RBP6.27□□□□□ -1.41
CCL16-206ENST00000613642 GOLGA6L4A6NEF3 574 aa6.27□□□□□ -1.41
CCL16-206ENST00000613642 H0Y3Z8 333 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms