RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FBXO2Q9UK22 296 aaPredicted RBP16.82■□□□□ 0.28
CDH1-213ENST00000612417 TUBB4AP04350 444 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 ATP1A3P13637 1013 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 SEC23AQ15436 765 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 FOXP4Q8IVH2 680 aaPredicted RBP16.81■□□□□ 0.28
CDH1-213ENST00000612417 KIF18AQ8NI77 898 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 SH3RF3Q8TEJ3 882 aaPredicted RBP16.81■□□□□ 0.28
CDH1-213ENST00000612417 DCP1AQ9NPI6 582 aaPredicted RBP16.81■□□□□ 0.28
CDH1-213ENST00000612417 PRDM4Q9UKN5 801 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 PCDHA5Q9Y5H7 936 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 KIAA1551Q9HCM1 1747 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 CCDC125Q86Z20 511 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 SLF2Q8IX21 1173 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 ZKSCAN3Q9BRR0 538 aa16.81■□□□□ 0.28
CDH1-213ENST00000612417 RNF26Q9BY78 433 aaPredicted RBP16.81■□□□□ 0.28
CDH1-213ENST00000612417 TRMT1Q9NXH9 659 aaKnown RBP16.81■□□□□ 0.28
CDH1-213ENST00000612417 FAM205AQ6ZU69 1335 aa16.8■□□□□ 0.28
CDH1-213ENST00000612417 SMIM22K7EJ46 135 aa16.8■□□□□ 0.28
CDH1-213ENST00000612417 ISM2Q6H9L7 571 aa16.8■□□□□ 0.28
CDH1-213ENST00000612417 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
CDH1-213ENST00000612417 ESR2Q92731 530 aa16.8■□□□□ 0.28
CDH1-213ENST00000612417 UBAC1Q9BSL1 405 aa16.8■□□□□ 0.28
CDH1-213ENST00000612417 KCNJ14Q9UNX9 436 aa16.8■□□□□ 0.28
CDH1-213ENST00000612417 UBASH3AP57075 661 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 PPP1R13BQ96KQ4 1090 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 ARID3AQ99856 593 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 GOLGB1Q14789 3259 aaKnown RBP16.79■□□□□ 0.28
CDH1-213ENST00000612417 F8W031 263 aaPredicted RBP16.79■□□□□ 0.28
CDH1-213ENST00000612417 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
CDH1-213ENST00000612417 BMP6P22004 513 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 BTDP43251 543 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 SLC4A8Q2Y0W8 1093 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 FEZ1Q99689 392 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 DBNDD1Q9H9R9 158 aa16.79■□□□□ 0.28
CDH1-213ENST00000612417 CGNQ9P2M7 1197 aaKnown RBP16.79■□□□□ 0.28
CDH1-213ENST00000612417 SRPRBQ9Y5M8 271 aaKnown RBP16.79■□□□□ 0.28
CDH1-213ENST00000612417 LAMB1P07942 1786 aa16.78■□□□□ 0.28
CDH1-213ENST00000612417 SARSP49591 514 aaKnown RBP16.78■□□□□ 0.28
CDH1-213ENST00000612417 PPP4CP60510 307 aa16.78■□□□□ 0.28
CDH1-213ENST00000612417 POSTNQ15063 836 aa16.78■□□□□ 0.28
CDH1-213ENST00000612417 VSTM4Q8IW00 320 aa16.78■□□□□ 0.28
CDH1-213ENST00000612417 TRIML1Q8N9V2 468 aa16.78■□□□□ 0.28
CDH1-213ENST00000612417 TGFBRAP1Q8WUH2 860 aa16.78■□□□□ 0.28
CDH1-213ENST00000612417 RTFDC1Q9BY42 306 aaPredicted RBP16.78■□□□□ 0.28
CDH1-213ENST00000612417 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
CDH1-213ENST00000612417 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
CDH1-213ENST00000612417 TNKSO95271 1327 aa16.78■□□□□ 0.28
CDH1-213ENST00000612417 CCP110O43303 1012 aa16.77■□□□□ 0.28
CDH1-213ENST00000612417 PRDM1O75626 825 aa16.77■□□□□ 0.28
CDH1-213ENST00000612417 SERPINC1P01008 464 aa16.77■□□□□ 0.28
CDH1-213ENST00000612417 FGRP09769 529 aa16.77■□□□□ 0.28
CDH1-213ENST00000612417 CYP2D6P10635 497 aa16.77■□□□□ 0.28
CDH1-213ENST00000612417 NR5A1Q13285 461 aa16.77■□□□□ 0.28
CDH1-213ENST00000612417 KANK3Q6NY19 840 aa16.77■□□□□ 0.28
CDH1-213ENST00000612417 PCDHB6Q9Y5E3 794 aa16.77■□□□□ 0.28
CDH1-213ENST00000612417 C21orf2O43822 256 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 ZBTB7AO95365 584 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 USP17L8P0C7I0 530 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 AMOTL1Q8IY63 956 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 MLKLQ8NB16 471 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 DPF2Q92785 391 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 ERO1AQ96HE7 468 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 MXD3Q9BW11 206 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 L2HGDHQ9H9P8 463 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 MAN1B1Q9UKM7 699 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.27
CDH1-213ENST00000612417 GPR75-ASB3A0A0A6YYF3 556 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 GRIN1Q05586 938 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 FUT2Q10981 343 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 CFAP100Q494V2 611 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 CERS3Q8IU89 383 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 MAPKAPK5Q8IW41 473 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 TEX11Q8IYF3 940 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 SPATA20Q8TB22 786 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 FANCLQ9NW38 375 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 ZNF215Q9UL58 517 aaPredicted RBP16.76■□□□□ 0.27
CDH1-213ENST00000612417 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 FOXN1O15353 648 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 POLR2DO15514 142 aaKnown RBP16.76■□□□□ 0.27
CDH1-213ENST00000612417 PLCG2P16885 1265 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 XBP1P17861 261 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 EVX2Q03828 476 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 PDE4BQ07343 736 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 MORC3Q14149 939 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 PODNQ7Z5L7 613 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 FCHSD1Q86WN1 690 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 TTLL6Q8N841 843 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 ENAHQ8N8S7 591 aaPredicted RBP16.76■□□□□ 0.27
CDH1-213ENST00000612417 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 C7orf43Q8WVR3 580 aa16.76■□□□□ 0.27
CDH1-213ENST00000612417 ZSCAN10Q96SZ4 725 aaPredicted RBP16.76■□□□□ 0.27
CDH1-213ENST00000612417 TTF2Q9UNY4 1162 aaKnown RBP16.76■□□□□ 0.27
CDH1-213ENST00000612417 ACTN4O43707 911 aaKnown RBP16.75■□□□□ 0.27
CDH1-213ENST00000612417 ZNF18P17022 549 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms