RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 VEGFBP49765 207 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 ZNF280AP59817 542 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-213ENST00000611963 NUCB2P80303 420 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 NBPF9Q3BBW0 867 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 IFIT1BQ5T764 474 aaKnown RBP9.46□□□□□ -0.9
TARDBP-213ENST00000611963 RBM26Q5T8P6 1007 aaKnown RBP9.46□□□□□ -0.9
TARDBP-213ENST00000611963 ZNF654Q8IZM8 581 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 ZNF444Q8N0Y2 327 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-213ENST00000611963 MTMR14Q8NCE2 650 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 TNPO1Q92973 898 aaKnown RBP9.46□□□□□ -0.9
TARDBP-213ENST00000611963 MTA3Q9BTC8 594 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 MYOZ2Q9NPC6 264 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 IL17RBQ9NRM6 502 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 SERPINB13Q9UIV8 391 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 SLC12A7Q9Y666 1083 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 ASTN2O75129 1339 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-213ENST00000611963 MYH15Q9Y2K3 1946 aa9.46□□□□□ -0.9
TARDBP-213ENST00000611963 TRPM7Q96QT4 1865 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 WNT10BO00744 389 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 ENTPD3O75355 529 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 BRD1O95696 1058 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 AKR1B1P15121 316 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 SYT1P21579 422 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 CDC27P30260 824 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 ADD1P35611 737 aaKnown RBP9.45□□□□□ -0.9
TARDBP-213ENST00000611963 RTN1Q16799 776 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 KIF4BQ2VIQ3 1234 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 RCSD1Q6JBY9 416 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 SYNE3Q6ZMZ3 975 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 SMARCC2Q8TAQ2 1214 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 NUP133Q8WUM0 1156 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 LLPHQ9BRT6 129 aaKnown RBP9.45□□□□□ -0.9
TARDBP-213ENST00000611963 DNAJC18Q9H819 358 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 ZNF287Q9HBT7 754 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 FAM217BQ9NTX9 383 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-213ENST00000611963 SCAF8Q9UPN6 1271 aaKnown RBP9.45□□□□□ -0.9
TARDBP-213ENST00000611963 COL2A1P02458 1487 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-213ENST00000611963 ATAD5Q96QE3 1844 aa9.45□□□□□ -0.9
TARDBP-213ENST00000611963 VPS37CA5D8V6 355 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-213ENST00000611963 CPLX1O14810 134 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 STX6O43752 255 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-213ENST00000611963 NBR1Q14596 966 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 SHROOM1Q2M3G4 852 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-213ENST00000611963 DEFB115Q30KQ5 88 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
TARDBP-213ENST00000611963 CATIPQ7Z7H3 387 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 USP48Q86UV5 1035 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 CLEC10AQ8IUN9 316 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 CDAN1Q8IWY9 1227 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 TMTC2Q8N394 836 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 CRACR2BQ8N4Y2 399 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-213ENST00000611963 NEDD1Q8NHV4 660 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 BBXQ8WY36 941 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-213ENST00000611963 CHMP4CQ96CF2 233 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 CHAMP1Q96JM3 812 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
TARDBP-213ENST00000611963 TRIM34Q9BYJ4 488 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 TMEM39BQ9GZU3 492 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 EHD4Q9H223 541 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 ABT1Q9ULW3 272 aaKnown RBP9.44□□□□□ -0.9
TARDBP-213ENST00000611963 MTMR6Q9Y217 621 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 TLL2Q9Y6L7 1015 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 NID2Q14112 1375 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 ATRNL1Q5VV63 1379 aa9.44□□□□□ -0.9
TARDBP-213ENST00000611963 PLIN4Q96Q06 1357 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 WDR33Q9C0J8 1336 aaKnown RBP9.43□□□□□ -0.9
TARDBP-213ENST00000611963 ADM5C9JUS6 153 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 MYO1BO43795 1136 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 CELF2O95319 508 aaKnown RBP9.43□□□□□ -0.9
TARDBP-213ENST00000611963 NT5C2P49902 561 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 HMGN5P82970 282 aaKnown RBP9.43□□□□□ -0.9
TARDBP-213ENST00000611963 FOXD4L6Q3SYB3 417 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-213ENST00000611963 FOXD4L3Q6VB84 417 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-213ENST00000611963 KRT26Q7Z3Y9 468 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 SAPCD2Q86UD0 394 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 FAM184AQ8NB25 1140 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 FAM151AQ8WW52 585 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 PHKBQ93100 1093 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 MARVELD3Q96A59 401 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 CEP95Q96GE4 821 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 DHX36Q9H2U1 1008 aaKnown RBP9.43□□□□□ -0.9
TARDBP-213ENST00000611963 KAT14Q9H8E8 782 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 TCP11L1Q9NUJ3 509 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 GGA3Q9NZ52 723 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 ORC3Q9UBD5 711 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-213ENST00000611963 PI4KBQ9UBF8 816 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 MTMR7Q9Y216 660 aa9.43□□□□□ -0.9
TARDBP-213ENST00000611963 THSD7BQ9C0I4 1608 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 IGKV6D-41A0A0C4DH26 115 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 UBE2Q2LH0YL09 131 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 MPHOSPH10O00566 681 aaKnown RBP9.42□□□□□ -0.9
TARDBP-213ENST00000611963 DHX16O60231 1041 aaKnown RBP9.42□□□□□ -0.9
TARDBP-213ENST00000611963 DDAH1O94760 285 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 PLEKHA8P1O95397 391 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 ZSCAN22P10073 491 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms