RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ARHGEF10LQ9HCE6 1279 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 CASP8AP2Q9UKL3 1982 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 AGTPBP1Q9UPW5 1226 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 PLIN4Q96Q06 1357 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 PDHXO00330 501 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 TBC1D8O95759 1140 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 ANAPC15P60006 121 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 TFAP4Q01664 338 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 PTH1RQ03431 593 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 IL27Q8NEV9 243 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 ACER1Q8TDN7 264 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 MAP4K1Q92918 833 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 PARK7Q99497 189 aaKnown RBP10.4□□□□□ -0.75
SMAD4-217ENST00000611848 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.75
SMAD4-217ENST00000611848 PRDM10Q9NQV6 1147 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 PNMA3Q9UL41 463 aa10.4□□□□□ -0.75
SMAD4-217ENST00000611848 MYH4Q9Y623 1939 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 IGKV6D-41A0A0C4DH26 115 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 TSPY2A6NKD2 308 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 ST18O60284 1047 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 RANBP6O60518 1105 aaKnown RBP10.39□□□□□ -0.75
SMAD4-217ENST00000611848 LBX1P52954 281 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 CRHR2Q13324 411 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 TOMM22Q9NS69 142 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 EMILIN3Q9NT22 766 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 NYAP2Q9P242 653 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 TSKSQ9UJT2 592 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 TMX2Q9Y320 296 aa10.39□□□□□ -0.75
SMAD4-217ENST00000611848 A0A1W2PRG0 241 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 TLR2O60603 784 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 EEF2P13639 858 aaKnown RBP10.38□□□□□ -0.75
SMAD4-217ENST00000611848 OSBPP22059 807 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 MCCP23508 829 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 HOXA7P31268 230 aaPredicted RBP10.38□□□□□ -0.75
SMAD4-217ENST00000611848 ATP2B2Q01814 1243 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 FAM47AQ5JRC9 791 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
SMAD4-217ENST00000611848 TREML2Q5T2D2 321 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 SIAH1Q8IUQ4 282 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 LPAR1Q92633 364 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 ESR2Q92731 530 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 MKL1Q969V6 931 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 LSG1Q9H089 658 aaKnown RBP10.38□□□□□ -0.75
SMAD4-217ENST00000611848 NBPF3Q9H094 633 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 INCENPQ9NQS7 918 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 MTMR4Q9NYA4 1195 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 SYNPO2Q9UMS6 1093 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
SMAD4-217ENST00000611848 GPR25O00155 361 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 TTLL1O95922 423 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 HSP90AA1P07900 732 aaKnown RBP10.37□□□□□ -0.75
SMAD4-217ENST00000611848 ZYXQ15942 572 aaKnown RBP10.37□□□□□ -0.75
SMAD4-217ENST00000611848 CLEC17AQ6ZS10 378 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 CLEC10AQ8IUN9 316 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 TBC1D10CQ8IV04 446 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 TNPO1Q92973 898 aaKnown RBP10.37□□□□□ -0.75
SMAD4-217ENST00000611848 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 KRT23Q9C075 422 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 R3HDMLQ9H3Y0 253 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 VCPKMTQ9H867 229 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 CNNM2Q9H8M5 875 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 ANO2Q9NQ90 1003 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 TCP11L1Q9NUJ3 509 aa10.37□□□□□ -0.75
SMAD4-217ENST00000611848 RBM8AQ9Y5S9 174 aaKnown RBP10.37□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L15C9J2P7 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L13C9JLJ4 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L11C9JVI0 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L18D6R9N7 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L22D6RA61 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L17D6RBQ6 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L19D6RCP7 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L20D6RJB6 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 FKTNO75072 461 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 CYP21A2P08686 494 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 MCM2P49736 904 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 IRX3P78415 501 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-217ENST00000611848 USP17L24Q0WX57 530 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 DGKZQ13574 1117 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 C17orf99Q6UX52 265 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 ASCC2Q9H1I8 757 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-217ENST00000611848 CLIP2Q9UDT6 1046 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 NEDD4P46934 1319 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 ADGRA2Q96PE1 1338 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 DDX11L8A8MPP1 907 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 CYP2C8P10632 490 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 VCAM1P19320 739 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 HSPA4P34932 840 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 GCLCP48506 637 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-217ENST00000611848 TRDNQ13061 729 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 TPRNQ4KMQ1 711 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 CCDC178Q5BJE1 867 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 CATSPERGQ6ZRH7 1159 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 SMCR8Q8TEV9 937 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-217ENST00000611848 GTF3C2Q8WUA4 911 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-217ENST00000611848 ZNF296Q8WUU4 475 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-217ENST00000611848 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
SMAD4-217ENST00000611848 IL17RBQ9NRM6 502 aa10.36□□□□□ -0.75
SMAD4-217ENST00000611848 B4E1Z4 1266 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms