RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SPECC1Q5M775 1068 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 ARL6IP4Q66PJ3 421 aaKnown RBP11.91□□□□□ -0.5
PABPC1-224ENST00000610907 ARMCX5Q6P1M9 558 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 SMIM5Q71RC9 77 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
PABPC1-224ENST00000610907 GSDMAQ96QA5 445 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 LZTS2Q9BRK4 669 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 FANCLQ9NW38 375 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 BBOX1O75936 387 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 CYP2D6P10635 497 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 ATP1A3P13637 1013 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 PLCG2P16885 1265 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 ZNF18P17022 549 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 PLCD1P51178 756 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 CFAP100Q494V2 611 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 FAM196AQ6ZSG2 479 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 FCHSD1Q86WN1 690 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 SLF2Q8IX21 1173 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-224ENST00000610907 TMX1Q9H3N1 280 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 MKNK2Q9HBH9 465 aa11.9□□□□□ -0.5
PABPC1-224ENST00000610907 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
PABPC1-224ENST00000610907 FOXN1O15353 648 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
PABPC1-224ENST00000610907 IL1R1P14778 569 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 GRM4Q14833 912 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 EARS2Q5JPH6 523 aaKnown RBP11.89□□□□□ -0.51
PABPC1-224ENST00000610907 TMC4Q7Z404 712 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 ZNF444Q8N0Y2 327 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-224ENST00000610907 IQUBQ8NA54 791 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 PNMA1Q8ND90 353 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 KIF18AQ8NI77 898 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 RPGRQ92834 1020 aaKnown RBP11.89□□□□□ -0.51
PABPC1-224ENST00000610907 RBM17Q96I25 401 aaKnown RBP11.89□□□□□ -0.51
PABPC1-224ENST00000610907 SBF2Q86WG5 1849 aa11.89□□□□□ -0.51
PABPC1-224ENST00000610907 NMT2O60551 498 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 CDK11BP21127 795 aaKnown RBP11.88□□□□□ -0.51
PABPC1-224ENST00000610907 SMARCA1P28370 1054 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 LONP1P36776 959 aaKnown RBP11.88□□□□□ -0.51
PABPC1-224ENST00000610907 ST5P78524 1137 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 PTGDRQ13258 359 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 ZNF174Q15697 407 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 PRR5LQ6MZQ0 368 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 USP49Q70CQ1 688 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 AMIGO3Q86WK7 504 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 BLIDQ8IZY5 108 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 PDILTQ8N807 584 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 DAGLBQ8NCG7 672 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 CCDC148Q8NFR7 591 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-224ENST00000610907 TBC1D22AQ8WUA7 517 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 ANKRD7Q92527 254 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
PABPC1-224ENST00000610907 PAGE5Q96GU1 130 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 IL17RBQ9NRM6 502 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 PODXL2Q9NZ53 605 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 PCDHA4Q9UN74 947 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 NFE2L3Q9Y4A8 694 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 GPR75-ASB3A0A0A6YYF3 556 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 TSPY3P0CV98 308 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 TSPY8P0CW00 308 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 HOXA10P31260 410 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-224ENST00000610907 DPYDQ12882 1025 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 TBX2Q13207 712 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-224ENST00000610907 SLC27A3Q5K4L6 730 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 SPATA1Q5VX52 437 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 E4F1Q66K89 784 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-224ENST00000610907 DPF2Q92785 391 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 DHX58Q96C10 678 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 EPSTI1Q96J88 318 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 CD209Q9NNX6 404 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
PABPC1-224ENST00000610907 USP27XA6NNY8 438 aa11.87□□□□□ -0.51
PABPC1-224ENST00000610907 GPSM2P81274 684 aa11.87□□□□□ -0.51
PABPC1-224ENST00000610907 SPECC1LQ69YQ0 1117 aa11.87□□□□□ -0.51
PABPC1-224ENST00000610907 PIK3AP1Q6ZUJ8 805 aa11.87□□□□□ -0.51
PABPC1-224ENST00000610907 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
PABPC1-224ENST00000610907 CTAGE1Q96RT6 745 aa11.87□□□□□ -0.51
PABPC1-224ENST00000610907 CRAMP1Q96RY5 1269 aa11.87□□□□□ -0.51
PABPC1-224ENST00000610907 RTFDC1Q9BY42 306 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-224ENST00000610907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
PABPC1-224ENST00000610907 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-224ENST00000610907 LAD1O00515 517 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 ARHGAP6O43182 974 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 SERPINB2P05120 415 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 GYS1P13807 737 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 TXLNAP40222 546 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 EVX2Q03828 476 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 FMR1Q06787 632 aaKnown RBP eCLIP11.86□□□□□ -0.517e-17■■■■■ 61.9
PABPC1-224ENST00000610907 E2F4Q16254 413 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 C16orf86Q6ZW13 317 aa11.86□□□□□ -0.51
PABPC1-224ENST00000610907 ILDR2Q71H61 639 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms