RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 MINDY4BA8MYZ0 360 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 HMGCRP04035 888 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 XRCC5P13010 732 aaKnown RBP15.41■□□□□ 0.06
SNX20-205ENST00000610485 CCNA1P78396 465 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 COG2Q14746 738 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 GPR142Q7Z601 462 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 PLEKHH3Q7Z736 793 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 USP6NLQ92738 828 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 EVI5LQ96CN4 794 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 NUDT12Q9BQG2 462 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 PAK6Q9NQU5 681 aaPredicted RBP15.41■□□□□ 0.06
SNX20-205ENST00000610485 BTBD7Q9P203 1132 aa15.41■□□□□ 0.06
SNX20-205ENST00000610485 PLXNB2O15031 1838 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 WDR46O15213 610 aaKnown RBP15.4■□□□□ 0.06
SNX20-205ENST00000610485 APPP05067 770 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 EEF2P13639 858 aaKnown RBP15.4■□□□□ 0.06
SNX20-205ENST00000610485 MORN1Q5T089 497 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 CCAR1Q8IX12 1150 aaKnown RBP15.4■□□□□ 0.06
SNX20-205ENST00000610485 U2AF1L4Q8WU68 220 aaKnown RBP15.4■□□□□ 0.06
SNX20-205ENST00000610485 TRIB2Q92519 343 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 NACAP1Q9BZK3 213 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 TANGO6Q9C0B7 1094 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 LNPKQ9C0E8 428 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 HOXC10Q9NYD6 342 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 MKI67P46013 3256 aaKnown RBP15.4■□□□□ 0.06
SNX20-205ENST00000610485 A0A0G2JMZ2 1700 aa15.4■□□□□ 0.06
SNX20-205ENST00000610485 GREB1LQ9C091 1923 aaPredicted RBP15.39■□□□□ 0.05
SNX20-205ENST00000610485 SGPL1O95470 568 aa15.39■□□□□ 0.05
SNX20-205ENST00000610485 IGHDP01880 384 aa15.39■□□□□ 0.05
SNX20-205ENST00000610485 CAPN2P17655 700 aa15.39■□□□□ 0.05
SNX20-205ENST00000610485 CYP2B6P20813 491 aa15.39■□□□□ 0.05
SNX20-205ENST00000610485 TICAM2Q86XR7 235 aa15.39■□□□□ 0.05
SNX20-205ENST00000610485 SPICE1Q8N0Z3 855 aa15.39■□□□□ 0.05
SNX20-205ENST00000610485 MKNK2Q9HBH9 465 aa15.39■□□□□ 0.05
SNX20-205ENST00000610485 MYH8P13535 1937 aa15.39■□□□□ 0.05
SNX20-205ENST00000610485 IGKV6D-41A0A0C4DH26 115 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 FOXP2O15409 715 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 DSG3P32926 999 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 RGS2P41220 211 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 NUCB1Q02818 461 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 TRIM32Q13049 653 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 CHD1LQ86WJ1 897 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 TRMT44Q8IYL2 757 aaKnown RBP15.38■□□□□ 0.05
SNX20-205ENST00000610485 STK11IPQ8N1F8 1099 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 MB21D1Q8N884 522 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 APBA2Q99767 749 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNX20-205ENST00000610485 NAPBQ9H115 298 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 ZNF287Q9HBT7 754 aa15.38■□□□□ 0.05
SNX20-205ENST00000610485 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
SNX20-205ENST00000610485 SLC15A5A6NIM6 579 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 FLOT1O75955 427 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 PTPREP23469 700 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 ATP2B2Q01814 1243 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 MAP2K5Q13163 448 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 MAP3K21Q5TCX8 1036 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 B4GALNT3Q6L9W6 998 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 CCDC129Q6ZRS4 1044 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 SHCBP1Q8NEM2 672 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 DEFB118Q96PH6 123 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 CRISPLD2Q9H0B8 497 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 CWC22Q9HCG8 908 aaKnown RBP15.37■□□□□ 0.05
SNX20-205ENST00000610485 GOPCQ9HD26 462 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 HELLSQ9NRZ9 838 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 NYAP2Q9P242 653 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 RPTORQ8N122 1335 aa15.37■□□□□ 0.05
SNX20-205ENST00000610485 PLIN4Q96Q06 1357 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 PRDM1O75626 825 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 ZKSCAN1P17029 563 aaPredicted RBP15.36■□□□□ 0.05
SNX20-205ENST00000610485 PPARAQ07869 468 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 GRB14Q14449 540 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 ZNF444Q8N0Y2 327 aaPredicted RBP15.36■□□□□ 0.05
SNX20-205ENST00000610485 ATG4CQ96DT6 458 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 MOV10L1Q9BXT6 1211 aaKnown RBP15.36■□□□□ 0.05
SNX20-205ENST00000610485 SPATC1LQ9H0A9 340 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 OSBPL3Q9H4L5 887 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 HMX1Q9NP08 348 aaPredicted RBP15.36■□□□□ 0.05
SNX20-205ENST00000610485 ADAMTS5Q9UNA0 930 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 RLFQ13129 1914 aa15.36■□□□□ 0.05
SNX20-205ENST00000610485 KIAA0100Q14667 2235 aaKnown RBP15.35■□□□□ 0.05
SNX20-205ENST00000610485 FARP2O94887 1054 aaPredicted RBP15.35■□□□□ 0.05
SNX20-205ENST00000610485 SLC3A2P08195 630 aaKnown RBP15.35■□□□□ 0.05
SNX20-205ENST00000610485 HOXC6P09630 235 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 PRKAR2AP13861 404 aaKnown RBP15.35■□□□□ 0.05
SNX20-205ENST00000610485 PDE4BQ07343 736 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 CCL14Q16627 93 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 VPS53Q5VIR6 699 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 WDR78Q5VTH9 848 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 FAM227BQ96M60 508 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 SYNPO2Q9UMS6 1093 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 IVNS1ABPQ9Y6Y0 642 aa15.35■□□□□ 0.05
SNX20-205ENST00000610485 A0A0D9SFI3 127 aa15.34■□□□□ 0.05
SNX20-205ENST00000610485 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
SNX20-205ENST00000610485 CENPBP07199 599 aaPredicted RBP15.34■□□□□ 0.05
SNX20-205ENST00000610485 FAM83BQ5T0W9 1011 aa15.34■□□□□ 0.05
SNX20-205ENST00000610485 NEDD1Q8NHV4 660 aa15.34■□□□□ 0.05
SNX20-205ENST00000610485 MKL1Q969V6 931 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms