RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 SPATC1LQ9H0A9 340 aa21.07■□□□□ 0.96
CHMP4A-211ENST00000609024 DBNLQ9UJU6 430 aaKnown RBP21.07■□□□□ 0.96
CHMP4A-211ENST00000609024 MYO5AQ9Y4I1 1855 aaKnown RBP21.07■□□□□ 0.96
CHMP4A-211ENST00000609024 ADCYAP1R1P41586 468 aa21.06■□□□□ 0.96
CHMP4A-211ENST00000609024 C9orf50Q5SZB4 431 aa21.06■□□□□ 0.96
CHMP4A-211ENST00000609024 MB21D1Q8N884 522 aa21.06■□□□□ 0.96
CHMP4A-211ENST00000609024 SHCBP1Q8NEM2 672 aa21.06■□□□□ 0.96
CHMP4A-211ENST00000609024 SSH3Q8TE77 659 aa21.06■□□□□ 0.96
CHMP4A-211ENST00000609024 MYLIPQ8WY64 445 aa21.06■□□□□ 0.96
CHMP4A-211ENST00000609024 MROH8Q9H579 483 aa21.06■□□□□ 0.96
CHMP4A-211ENST00000609024 DNAH12Q6ZR08 3092 aa21.06■□□□□ 0.96
CHMP4A-211ENST00000609024 MAGEB6P1A0A0J9YX57 407 aa21.05■□□□□ 0.96
CHMP4A-211ENST00000609024 SHMT1P34896 483 aa21.05■□□□□ 0.96
CHMP4A-211ENST00000609024 ZKSCAN2Q63HK3 967 aa21.05■□□□□ 0.96
CHMP4A-211ENST00000609024 SAMD1Q6SPF0 538 aaPredicted RBP21.05■□□□□ 0.96
CHMP4A-211ENST00000609024 SYMPKQ92797 1274 aaKnown RBP21.05■□□□□ 0.96
CHMP4A-211ENST00000609024 CRNKL1Q9BZJ0 848 aaKnown RBP21.05■□□□□ 0.96
CHMP4A-211ENST00000609024 LTBP2Q14767 1821 aa21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 PLCD1P51178 756 aa21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 TMEM57Q8N5G2 664 aa21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 RNPC3Q96LT9 517 aaKnown RBP21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 SH2D4AQ9H788 454 aa21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 PDLIM7Q9NR12 457 aa21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 MCM9Q9NXL9 1143 aa21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 TLR7Q9NYK1 1049 aaKnown RBP21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 TNNQ9UQP3 1299 aa21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 TACC3Q9Y6A5 838 aa21.04■□□□□ 0.96
CHMP4A-211ENST00000609024 FLOT1O75955 427 aa21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 RARBP10826 455 aa21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 FCER1AP12319 257 aa21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 LRRC41Q15345 812 aa21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 TTF1Q15361 905 aaPredicted RBP21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 PRAMEF19Q5SWL8 479 aa21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 RNF180Q86T96 592 aa21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 ARHGEF10LQ9HCE6 1279 aa21.03■□□□□ 0.96
CHMP4A-211ENST00000609024 RLFQ13129 1914 aa21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 COBLO75128 1261 aa21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 RAG1P15918 1043 aa21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 SNX17Q15036 470 aa21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 TMEM179Q6ZVK1 233 aa21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 ABRAQ8N0Z2 381 aa21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 EAF2Q96CJ1 260 aaPredicted RBP21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 C1orf115Q9H7X2 142 aa21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 XPNPEP3Q9NQH7 507 aa21.02■□□□□ 0.96
CHMP4A-211ENST00000609024 ZNF236Q9UL36 1845 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 CLTBP09497 229 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 DSG3P32926 999 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 GUCY1A2P33402 732 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 TLE2Q04725 743 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 FAM47AQ5JRC9 791 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 C1orf53Q5VUE5 145 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 MAML3Q96JK9 1138 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 ANTXR1Q9H6X2 564 aa21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
CHMP4A-211ENST00000609024 TMEM265A0A087WTH1 108 aa21■□□□□ 0.95
CHMP4A-211ENST00000609024 TRIM43BA6NCK2 446 aa21■□□□□ 0.95
CHMP4A-211ENST00000609024 SH3RF1Q7Z6J0 888 aa21■□□□□ 0.95
CHMP4A-211ENST00000609024 AACSQ86V21 672 aa21■□□□□ 0.95
CHMP4A-211ENST00000609024 ERC1Q8IUD2 1116 aa21■□□□□ 0.95
CHMP4A-211ENST00000609024 TRIM43Q96BQ3 446 aaPredicted RBP21■□□□□ 0.95
CHMP4A-211ENST00000609024 TTYH1Q9H313 450 aaPredicted RBP21■□□□□ 0.95
CHMP4A-211ENST00000609024 SWAP70Q9UH65 585 aa21■□□□□ 0.95
CHMP4A-211ENST00000609024 LAMA2P24043 3122 aaKnown RBP20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 A0A1W2PRG0 241 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 SLC25A27O95847 323 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 IGHA2P01877 340 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 KCTD2Q14681 263 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 SLC9C2Q5TAH2 1124 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 AMOTL1Q8IY63 956 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 SPICE1Q8N0Z3 855 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 MMP19Q99542 508 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 RIOK1Q9BRS2 568 aaKnown RBP20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 PRDM6Q9NQX0 595 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 NRBP1Q9UHY1 535 aa20.99■□□□□ 0.95
CHMP4A-211ENST00000609024 PQBP1O60828 265 aaKnown RBP20.98■□□□□ 0.95
CHMP4A-211ENST00000609024 FPGSQ05932 587 aa20.98■□□□□ 0.95
CHMP4A-211ENST00000609024 ITPRIPQ8IWB1 547 aa20.98■□□□□ 0.95
CHMP4A-211ENST00000609024 ATG4CQ96DT6 458 aa20.98■□□□□ 0.95
CHMP4A-211ENST00000609024 TMEM39AQ9NV64 488 aa20.98■□□□□ 0.95
CHMP4A-211ENST00000609024 PHF24Q9UPV7 400 aa20.98■□□□□ 0.95
CHMP4A-211ENST00000609024 NAV1Q8NEY1 1877 aa20.98■□□□□ 0.95
CHMP4A-211ENST00000609024 ICA1Q05084 483 aa20.97■□□□□ 0.95
CHMP4A-211ENST00000609024 GABPAQ06546 454 aa20.97■□□□□ 0.95
CHMP4A-211ENST00000609024 CNPY2Q9Y2B0 182 aa20.97■□□□□ 0.95
CHMP4A-211ENST00000609024 DCDC2CA8MYV0 355 aa20.96■□□□□ 0.95
CHMP4A-211ENST00000609024 WDR46O15213 610 aaKnown RBP20.96■□□□□ 0.95
CHMP4A-211ENST00000609024 RAD21O60216 631 aa20.96■□□□□ 0.95
CHMP4A-211ENST00000609024 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
CHMP4A-211ENST00000609024 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 PGK1P00558 417 aa20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 AKR1A1P14550 325 aa20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 PDE6AP16499 860 aa20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 NUP133Q8WUM0 1156 aa20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 SDR42E1Q8WUS8 393 aa20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 TINF2Q9BSI4 451 aa20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 VCPKMTQ9H867 229 aa20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 TMX2Q9Y320 296 aa20.95■□□□□ 0.94
CHMP4A-211ENST00000609024 A0A1W2PQ45 241 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms