RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 SMIM22K7EJ46 135 aa22.92■■□□□ 1.26
CTSA-217ENST00000607482 PLEKHH3Q7Z736 793 aa22.92■■□□□ 1.26
CTSA-217ENST00000607482 CLEC10AQ8IUN9 316 aa22.92■■□□□ 1.26
CTSA-217ENST00000607482 SEC62Q99442 399 aaKnown RBP22.92■■□□□ 1.26
CTSA-217ENST00000607482 UNC93B1Q9H1C4 597 aa22.92■■□□□ 1.26
CTSA-217ENST00000607482 TNRC18O15417 2968 aaPredicted RBP22.91■■□□□ 1.26
CTSA-217ENST00000607482 MYH8P13535 1937 aa22.91■■□□□ 1.26
CTSA-217ENST00000607482 FLOT1O75955 427 aa22.91■■□□□ 1.26
CTSA-217ENST00000607482 GJB1P08034 283 aa22.91■■□□□ 1.26
CTSA-217ENST00000607482 EEF2P13639 858 aaKnown RBP22.91■■□□□ 1.26
CTSA-217ENST00000607482 Q3C1V9 767 aa22.91■■□□□ 1.26
CTSA-217ENST00000607482 ZMYM1Q5SVZ6 1142 aa22.91■■□□□ 1.26
CTSA-217ENST00000607482 IFNL3Q8IZI9 196 aa22.91■■□□□ 1.26
CTSA-217ENST00000607482 STAP2Q9UGK3 403 aa22.91■■□□□ 1.26
CTSA-217ENST00000607482 TMX2Q9Y320 296 aa22.91■■□□□ 1.26
CTSA-217ENST00000607482 TFRCP02786 760 aaKnown RBP22.9■■□□□ 1.26
CTSA-217ENST00000607482 HMGCRP04035 888 aa22.9■■□□□ 1.26
CTSA-217ENST00000607482 PDE4BQ07343 736 aa22.9■■□□□ 1.26
CTSA-217ENST00000607482 PLS1Q14651 629 aa22.9■■□□□ 1.26
CTSA-217ENST00000607482 GPR142Q7Z601 462 aa22.9■■□□□ 1.26
CTSA-217ENST00000607482 RILPL2Q969X0 211 aa22.9■■□□□ 1.26
CTSA-217ENST00000607482 VCPKMTQ9H867 229 aa22.9■■□□□ 1.26
CTSA-217ENST00000607482 RGS2P41220 211 aa22.89■■□□□ 1.25
CTSA-217ENST00000607482 GJA8P48165 433 aa22.89■■□□□ 1.25
CTSA-217ENST00000607482 PRPF38BQ5VTL8 546 aaKnown RBP22.89■■□□□ 1.25
CTSA-217ENST00000607482 CHD1LQ86WJ1 897 aa22.89■■□□□ 1.25
CTSA-217ENST00000607482 TRMT44Q8IYL2 757 aaKnown RBP22.89■■□□□ 1.25
CTSA-217ENST00000607482 PORCNQ9H237 461 aa22.89■■□□□ 1.25
CTSA-217ENST00000607482 GJD2Q9UKL4 321 aa22.89■■□□□ 1.25
CTSA-217ENST00000607482 SPDYE16A6NNV3 312 aaPredicted RBP22.88■■□□□ 1.25
CTSA-217ENST00000607482 ZKSCAN1P17029 563 aaPredicted RBP22.88■■□□□ 1.25
CTSA-217ENST00000607482 U2AF1L4Q8WU68 220 aaKnown RBP22.88■■□□□ 1.25
CTSA-217ENST00000607482 DEFB118Q96PH6 123 aa22.88■■□□□ 1.25
CTSA-217ENST00000607482 EPB41L4AQ9HCS5 686 aaPredicted RBP22.88■■□□□ 1.25
CTSA-217ENST00000607482 PDE4DIPQ5VU43 2346 aa22.88■■□□□ 1.25
CTSA-217ENST00000607482 SALL3Q9BXA9 1300 aa22.87■■□□□ 1.25
CTSA-217ENST00000607482 RBBP6Q7Z6E9 1792 aaKnown RBP22.87■■□□□ 1.25
CTSA-217ENST00000607482 WDR46O15213 610 aaKnown RBP22.87■■□□□ 1.25
CTSA-217ENST00000607482 PRDM1O75626 825 aa22.87■■□□□ 1.25
CTSA-217ENST00000607482 LBX2Q6XYB7 198 aa22.87■■□□□ 1.25
CTSA-217ENST00000607482 SMC5Q8IY18 1101 aa22.87■■□□□ 1.25
CTSA-217ENST00000607482 MB21D1Q8N884 522 aa22.87■■□□□ 1.25
CTSA-217ENST00000607482 HMX1Q9NP08 348 aaPredicted RBP22.87■■□□□ 1.25
CTSA-217ENST00000607482 IGHDP01880 384 aa22.86■■□□□ 1.25
CTSA-217ENST00000607482 TSPY3P0CV98 308 aa22.86■■□□□ 1.25
CTSA-217ENST00000607482 TSPY8P0CW00 308 aa22.86■■□□□ 1.25
CTSA-217ENST00000607482 XRCC5P13010 732 aaKnown RBP22.86■■□□□ 1.25
CTSA-217ENST00000607482 RASA1P20936 1047 aa22.86■■□□□ 1.25
CTSA-217ENST00000607482 SIAH1Q8IUQ4 282 aa22.86■■□□□ 1.25
CTSA-217ENST00000607482 HELLSQ9NRZ9 838 aa22.86■■□□□ 1.25
CTSA-217ENST00000607482 ISY1Q9ULR0 285 aaKnown RBP22.86■■□□□ 1.25
CTSA-217ENST00000607482 BRCA2P51587 3418 aa22.85■■□□□ 1.25
CTSA-217ENST00000607482 CNMDO75829 334 aa22.85■■□□□ 1.25
CTSA-217ENST00000607482 SGPL1O95470 568 aa22.85■■□□□ 1.25
CTSA-217ENST00000607482 NUCB1Q02818 461 aa22.85■■□□□ 1.25
CTSA-217ENST00000607482 PPARAQ07869 468 aa22.85■■□□□ 1.25
CTSA-217ENST00000607482 CCDC129Q6ZRS4 1044 aa22.85■■□□□ 1.25
CTSA-217ENST00000607482 BTBD7Q9P203 1132 aa22.85■■□□□ 1.25
CTSA-217ENST00000607482 CLIP2Q9UDT6 1046 aa22.85■■□□□ 1.25
CTSA-217ENST00000607482 CTDP1Q9Y5B0 961 aaPredicted RBP22.85■■□□□ 1.25
CTSA-217ENST00000607482 CAPN2P17655 700 aa22.84■■□□□ 1.25
CTSA-217ENST00000607482 DSG3P32926 999 aa22.84■■□□□ 1.25
CTSA-217ENST00000607482 KIAA1755Q5JYT7 1200 aa22.84■■□□□ 1.25
CTSA-217ENST00000607482 DPF3Q92784 378 aa22.84■■□□□ 1.25
CTSA-217ENST00000607482 APBA2Q99767 749 aa22.84■■□□□ 1.25
CTSA-217ENST00000607482 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.84■■□□□ 1.25
CTSA-217ENST00000607482 ROBO3Q96MS0 1386 aa22.84■■□□□ 1.25
CTSA-217ENST00000607482 RPTORQ8N122 1335 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 SLC15A5A6NIM6 579 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 FARP2O94887 1054 aaPredicted RBP22.83■■□□□ 1.25
CTSA-217ENST00000607482 IRX6P78412 446 aaPredicted RBP22.83■■□□□ 1.25
CTSA-217ENST00000607482 MAP2K5Q13163 448 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 MCMDC2Q4G0Z9 681 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 DPP9Q86TI2 863 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 NCAPG2Q86XI2 1143 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 TRIB2Q92519 343 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 HTATIP2Q9BUP3 242 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 SPATC1LQ9H0A9 340 aa22.83■■□□□ 1.25
CTSA-217ENST00000607482 DOCK3Q8IZD9 2030 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 PRKAR2AP13861 404 aaKnown RBP22.82■■□□□ 1.24
CTSA-217ENST00000607482 PTPREP23469 700 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 MFAP1P55081 439 aaKnown RBP22.82■■□□□ 1.24
CTSA-217ENST00000607482 MORN1Q5T089 497 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 FAM83BQ5T0W9 1011 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 MFSD14CQ5VZR4 134 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 POTEEQ6S8J3 1075 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 TICAM2Q86XR7 235 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 ATG4CQ96DT6 458 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 TOMM22Q9NS69 142 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 SLC5A4Q9NY91 659 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 NYAP2Q9P242 653 aa22.82■■□□□ 1.24
CTSA-217ENST00000607482 TTLL1O95922 423 aa22.81■■□□□ 1.24
CTSA-217ENST00000607482 TFAP4Q01664 338 aa22.81■■□□□ 1.24
CTSA-217ENST00000607482 PPP4R3BQ5MIZ7 849 aa22.81■■□□□ 1.24
CTSA-217ENST00000607482 SHISA4Q96DD7 197 aa22.81■■□□□ 1.24
CTSA-217ENST00000607482 MOV10L1Q9BXT6 1211 aaKnown RBP22.81■■□□□ 1.24
CTSA-217ENST00000607482 MROH8Q9H579 483 aa22.81■■□□□ 1.24
CTSA-217ENST00000607482 PAK6Q9NQU5 681 aaPredicted RBP22.81■■□□□ 1.24
CTSA-217ENST00000607482 MKI67P46013 3256 aaKnown RBP22.8■■□□□ 1.24
CTSA-217ENST00000607482 TSPY2A6NKD2 308 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms