RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 COG2Q14746 738 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 LRRC26Q2I0M4 334 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 LHX8Q68G74 356 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 TMEM179Q6ZVK1 233 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
CTSA-216ENST00000607212 TDHQ8IZJ6 230 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 SLC44A5Q8NCS7 719 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 NPLOC4Q8TAT6 608 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.94■□□□□ 0.46
CTSA-216ENST00000607212 DYNLL2Q96FJ2 89 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.94■□□□□ 0.46
CTSA-216ENST00000607212 SH2D4AQ9H788 454 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 DCP1AQ9NPI6 582 aaPredicted RBP17.94■□□□□ 0.46
CTSA-216ENST00000607212 PAG1Q9NWQ8 432 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 PRKAG2Q9UGJ0 569 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 SWAP70Q9UH65 585 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 DDX19BQ9UMR2 479 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
CTSA-216ENST00000607212 MSCO60682 206 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 RAB11FIP3O75154 756 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 FLOT1O75955 427 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 MBD4O95243 580 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 ICA1Q05084 483 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 GABPAQ06546 454 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 LBX2Q6XYB7 198 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 NCAPG2Q86XI2 1143 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 LBHD1Q9BQE6 289 aaPredicted RBP17.93■□□□□ 0.46
CTSA-216ENST00000607212 MOV10L1Q9BXT6 1211 aaKnown RBP17.93■□□□□ 0.46
CTSA-216ENST00000607212 SLC5A4Q9NY91 659 aa17.93■□□□□ 0.46
CTSA-216ENST00000607212 A0A1W2PRG0 241 aa17.92■□□□□ 0.46
CTSA-216ENST00000607212 COL6A1P12109 1028 aa17.92■□□□□ 0.46
CTSA-216ENST00000607212 ADORA2AP29274 412 aa17.92■□□□□ 0.46
CTSA-216ENST00000607212 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
CTSA-216ENST00000607212 DEFB123Q8N688 67 aa17.92■□□□□ 0.46
CTSA-216ENST00000607212 SPATC1LQ9H0A9 340 aa17.92■□□□□ 0.46
CTSA-216ENST00000607212 CHMP4BQ9H444 224 aaKnown RBP17.92■□□□□ 0.46
CTSA-216ENST00000607212 MYH7P12883 1935 aa17.92■□□□□ 0.46
CTSA-216ENST00000607212 PRKAB2O43741 272 aa17.91■□□□□ 0.46
CTSA-216ENST00000607212 AKR1B1P15121 316 aa17.91■□□□□ 0.46
CTSA-216ENST00000607212 ERCC3P19447 782 aa17.91■□□□□ 0.46
CTSA-216ENST00000607212 ANO1Q5XXA6 986 aa17.91■□□□□ 0.46
CTSA-216ENST00000607212 CLEC10AQ8IUN9 316 aa17.91■□□□□ 0.46
CTSA-216ENST00000607212 LPAR1Q92633 364 aa17.91■□□□□ 0.46
CTSA-216ENST00000607212 TCRBV5S4A2TA0A5A2 114 aa17.9■□□□□ 0.46
CTSA-216ENST00000607212 KBTBD13C9JR72 458 aa17.9■□□□□ 0.46
CTSA-216ENST00000607212 HOXC6P09630 235 aa17.9■□□□□ 0.46
CTSA-216ENST00000607212 ADD2P35612 726 aa17.9■□□□□ 0.46
CTSA-216ENST00000607212 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
CTSA-216ENST00000607212 Q7L0L9 218 aa17.9■□□□□ 0.46
CTSA-216ENST00000607212 ATP8A2Q9NTI2 1148 aa17.9■□□□□ 0.46
CTSA-216ENST00000607212 CYP2D7A0A087X1C5 515 aa17.89■□□□□ 0.45
CTSA-216ENST00000607212 STRNO43815 780 aa17.89■□□□□ 0.45
CTSA-216ENST00000607212 DSG3P32926 999 aa17.89■□□□□ 0.45
CTSA-216ENST00000607212 GJC2Q5T442 439 aaPredicted RBP17.89■□□□□ 0.45
CTSA-216ENST00000607212 MB21D1Q8N884 522 aa17.89■□□□□ 0.45
CTSA-216ENST00000607212 ATG4CQ96DT6 458 aa17.89■□□□□ 0.45
CTSA-216ENST00000607212 ATP11BQ9Y2G3 1177 aa17.89■□□□□ 0.45
CTSA-216ENST00000607212 SLC4A4Q9Y6R1 1079 aa17.89■□□□□ 0.45
CTSA-216ENST00000607212 DNM1LO00429 736 aa17.88■□□□□ 0.45
CTSA-216ENST00000607212 LRIT3Q3SXY7 679 aa17.88■□□□□ 0.45
CTSA-216ENST00000607212 ZSCAN25Q6NSZ9 544 aa17.88■□□□□ 0.45
CTSA-216ENST00000607212 ARRDC4Q8NCT1 418 aa17.88■□□□□ 0.45
CTSA-216ENST00000607212 SHCBP1Q8NEM2 672 aa17.88■□□□□ 0.45
CTSA-216ENST00000607212 TRPV1Q8NER1 839 aa17.88■□□□□ 0.45
CTSA-216ENST00000607212 CCDC17Q96LX7 622 aa17.88■□□□□ 0.45
CTSA-216ENST00000607212 MROH8Q9H579 483 aa17.88■□□□□ 0.45
CTSA-216ENST00000607212 PRDM5Q9NQX1 630 aaPredicted RBP17.88■□□□□ 0.45
CTSA-216ENST00000607212 USP17L12C9JPN9 530 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 USP17L21D6R901 530 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 DLL1O00548 723 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 WDR46O15213 610 aaKnown RBP17.87■□□□□ 0.45
CTSA-216ENST00000607212 CYBAP13498 195 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 ATP5JP18859 108 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 CDK8P49336 464 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 RTP1P59025 263 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 KIAA1755Q5JYT7 1200 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 OLFML2BQ68BL8 750 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 STK11IPQ8N1F8 1099 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 VCPKMTQ9H867 229 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 TMX2Q9Y320 296 aa17.87■□□□□ 0.45
CTSA-216ENST00000607212 ZNFX1Q9P2E3 1918 aaKnown RBP17.87■□□□□ 0.45
CTSA-216ENST00000607212 A0A0G2JMZ2 1700 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 ZNF236Q9UL36 1845 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 FCER1AP12319 257 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 PRAMEF19Q5SWL8 479 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 GPR153Q6NV75 609 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 SIRT2Q8IXJ6 389 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 MMP19Q99542 508 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 HAUS7Q99871 368 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
CTSA-216ENST00000607212 COL11A1P12107 1806 aaPredicted RBP17.86■□□□□ 0.45
CTSA-216ENST00000607212 SZT2Q5T011 3432 aa17.85■□□□□ 0.45
CTSA-216ENST00000607212 COBLO75128 1261 aa17.85■□□□□ 0.45
CTSA-216ENST00000607212 EEF2P13639 858 aaKnown RBP17.85■□□□□ 0.45
CTSA-216ENST00000607212 RLFQ13129 1914 aa17.85■□□□□ 0.45
CTSA-216ENST00000607212 C12orf60Q5U649 245 aa17.85■□□□□ 0.45
CTSA-216ENST00000607212 LRRCC1Q9C099 1032 aa17.85■□□□□ 0.45
CTSA-216ENST00000607212 SEPT4O43236 478 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms