RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 TSPY3P0CV98 308 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 TSPY8P0CW00 308 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 TFAP4Q01664 338 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 CTDSPL2Q05D32 466 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 SPICE1Q8N0Z3 855 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 NEDD1Q8NHV4 660 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 ARMC5Q96C12 935 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 TANGO6Q9C0B7 1094 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 RABGAP1Q9Y3P9 1069 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 MYPNQ86TC9 1320 aa19.67■□□□□ 0.74
LINC00240-203ENST00000606878 RAD21O60216 631 aa19.66■□□□□ 0.74
LINC00240-203ENST00000606878 NEFLP07196 543 aa19.66■□□□□ 0.74
LINC00240-203ENST00000606878 GSPT1P15170 499 aaKnown RBP19.66■□□□□ 0.74
LINC00240-203ENST00000606878 KIAA1755Q5JYT7 1200 aa19.66■□□□□ 0.74
LINC00240-203ENST00000606878 PAGR1Q9BTK6 254 aa19.66■□□□□ 0.74
LINC00240-203ENST00000606878 TXNRD2Q9NNW7 524 aa19.66■□□□□ 0.74
LINC00240-203ENST00000606878 CLIP2Q9UDT6 1046 aa19.66■□□□□ 0.74
LINC00240-203ENST00000606878 ERVK-9P63128 1117 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 ERVK-24P63145 666 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 CCNA1P78396 465 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 PRKCZQ05513 592 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 Q3C1V9 767 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 FAM47AQ5JRC9 791 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 LBX2Q6XYB7 198 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 MKL1Q969V6 931 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 INCENPQ9NQS7 918 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 MTMR4Q9NYA4 1195 aa19.65■□□□□ 0.74
LINC00240-203ENST00000606878 IGKV6D-41A0A0C4DH26 115 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 WDR46O15213 610 aaKnown RBP19.64■□□□□ 0.73
LINC00240-203ENST00000606878 PEX10O60683 326 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 TTLL1O95922 423 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 FGRP09769 529 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 FLT3LGP49771 235 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 PPP4R3BQ5MIZ7 849 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 RUFY2Q8WXA3 655 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 CEP95Q96GE4 821 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 GABRQQ9UN88 632 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.64■□□□□ 0.73
LINC00240-203ENST00000606878 LOC285556D6RIA3 1793 aa19.64■□□□□ 0.73
LINC00240-203ENST00000606878 ZMYM6O95789 1325 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 TSPY2A6NKD2 308 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 F5H6K3 240 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 ORC4O43929 436 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 RANBP6O60518 1105 aaKnown RBP19.63■□□□□ 0.73
LINC00240-203ENST00000606878 FLOT1O75955 427 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 MAPK4P31152 587 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 GRK4P32298 578 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 DSG3P32926 999 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 RGS19P49795 217 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 SOX10P56693 466 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 KLRC3Q07444 240 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 POTEEQ6S8J3 1075 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 CCDC136Q96JN2 1154 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 TOMM22Q9NS69 142 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 BIN2Q9UBW5 565 aaPredicted RBP19.63■□□□□ 0.73
LINC00240-203ENST00000606878 SYNPO2Q9UMS6 1093 aa19.63■□□□□ 0.73
LINC00240-203ENST00000606878 SPDYE16A6NNV3 312 aaPredicted RBP19.62■□□□□ 0.73
LINC00240-203ENST00000606878 ZNF213O14771 459 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 PCP11498 1178 aaKnown RBP19.62■□□□□ 0.73
LINC00240-203ENST00000606878 HAND2P61296 217 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 IRF5Q13568 498 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 MFSD6Q6ZSS7 791 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 SH3TC2Q8TF17 1288 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 ZNF333Q96JL9 665 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 DSCC1Q9BVC3 393 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 TMEM106CQ9BVX2 250 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 CWC22Q9HCG8 908 aaKnown RBP19.62■□□□□ 0.73
LINC00240-203ENST00000606878 CTNNA3Q9UI47 895 aa19.62■□□□□ 0.73
LINC00240-203ENST00000606878 ADCY3O60266 1144 aa19.61■□□□□ 0.73
LINC00240-203ENST00000606878 CHMLP26374 656 aa19.61■□□□□ 0.73
LINC00240-203ENST00000606878 RRP12Q5JTH9 1297 aaKnown RBP19.61■□□□□ 0.73
LINC00240-203ENST00000606878 MB21D1Q8N884 522 aa19.61■□□□□ 0.73
LINC00240-203ENST00000606878 SLAIN1Q8ND83 568 aa19.61■□□□□ 0.73
LINC00240-203ENST00000606878 RNF41Q9H4P4 317 aaPredicted RBP19.61■□□□□ 0.73
LINC00240-203ENST00000606878 GJD2Q9UKL4 321 aa19.61■□□□□ 0.73
LINC00240-203ENST00000606878 CNMDO75829 334 aa19.6■□□□□ 0.73
LINC00240-203ENST00000606878 FAM83BQ5T0W9 1011 aa19.6■□□□□ 0.73
LINC00240-203ENST00000606878 AKNAD1Q5T1N1 836 aa19.6■□□□□ 0.73
LINC00240-203ENST00000606878 SAMD1Q6SPF0 538 aaPredicted RBP19.6■□□□□ 0.73
LINC00240-203ENST00000606878 PLEKHH3Q7Z736 793 aa19.6■□□□□ 0.73
LINC00240-203ENST00000606878 PXYLP1Q8TE99 480 aa19.6■□□□□ 0.73
LINC00240-203ENST00000606878 PORCNQ9H237 461 aa19.6■□□□□ 0.73
LINC00240-203ENST00000606878 BTBD7Q9P203 1132 aa19.6■□□□□ 0.73
LINC00240-203ENST00000606878 TACC3Q9Y6A5 838 aa19.6■□□□□ 0.73
LINC00240-203ENST00000606878 KIAA0100Q14667 2235 aaKnown RBP19.59■□□□□ 0.73
LINC00240-203ENST00000606878 NDUFB10O96000 172 aa19.59■□□□□ 0.73
LINC00240-203ENST00000606878 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
LINC00240-203ENST00000606878 UBXN2AP68543 259 aa19.59■□□□□ 0.73
LINC00240-203ENST00000606878 NUDT12Q9BQG2 462 aa19.59■□□□□ 0.73
LINC00240-203ENST00000606878 IL17RBQ9NRM6 502 aa19.59■□□□□ 0.73
LINC00240-203ENST00000606878 STX8Q9UNK0 236 aa19.59■□□□□ 0.73
LINC00240-203ENST00000606878 PLIN4Q96Q06 1357 aa19.58■□□□□ 0.73
LINC00240-203ENST00000606878 MYCP01106 439 aaPredicted RBP19.58■□□□□ 0.72
LINC00240-203ENST00000606878 IMMTQ16891 758 aaKnown RBP19.58■□□□□ 0.72
LINC00240-203ENST00000606878 WDR78Q5VTH9 848 aa19.58■□□□□ 0.72
LINC00240-203ENST00000606878 SLFN13Q68D06 897 aa19.58■□□□□ 0.72
LINC00240-203ENST00000606878 GPR142Q7Z601 462 aa19.58■□□□□ 0.72
LINC00240-203ENST00000606878 GMCL1P1Q8NEA9 526 aa19.58■□□□□ 0.72
LINC00240-203ENST00000606878 STAG1Q8WVM7 1258 aa19.58■□□□□ 0.72
LINC00240-203ENST00000606878 ATG4CQ96DT6 458 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms