RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 EIF3HO15372 352 aaKnown RBP eCLIP17.36■□□□□ 0.37
RER1-209ENST00000605895 HERVK_113P62684 666 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 FMN2Q9NZ56 1722 aa17.36■□□□□ 0.37
RER1-209ENST00000605895 GRIN2DO15399 1336 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 COPB1P53618 953 aaKnown RBP17.35■□□□□ 0.37
RER1-209ENST00000605895 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
RER1-209ENST00000605895 SETQ01105 290 aaPredicted RBP17.35■□□□□ 0.37
RER1-209ENST00000605895 CUL4BQ13620 913 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 SLC24A3Q9HC58 644 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 ANKARQ7Z5J8 1434 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 MYO1BO43795 1136 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 PPFIA1Q13136 1202 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 SWT1Q5T5J6 900 aaKnown RBP17.35■□□□□ 0.37
RER1-209ENST00000605895 IFT81Q8WYA0 676 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 AGPAT5Q9NUQ2 364 aa17.35■□□□□ 0.37
RER1-209ENST00000605895 ZSCAN5CA6NGD5 496 aaPredicted RBP17.34■□□□□ 0.37
RER1-209ENST00000605895 EYA2O00167 538 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 ERCC5P28715 1186 aaPredicted RBP17.34■□□□□ 0.37
RER1-209ENST00000605895 IFT88Q13099 833 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 E2F5Q15329 346 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 TTMPQ5BVD1 217 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 KCNJ18B7U540 433 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 HPDP32754 393 aaPredicted RBP17.34■□□□□ 0.37
RER1-209ENST00000605895 GUCY2FP51841 1108 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 GSCP56915 257 aaPredicted RBP17.34■□□□□ 0.37
RER1-209ENST00000605895 FAM69CQ0P6D2 419 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 KCNJ12Q14500 433 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 ZSWIM5Q9P217 1185 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 PTPRUQ92729 1446 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 NCK2O43639 380 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 RABL6Q3YEC7 729 aaPredicted RBP17.34■□□□□ 0.37
RER1-209ENST00000605895 ESCO1Q5FWF5 840 aa17.34■□□□□ 0.37
RER1-209ENST00000605895 PROCA1Q8NCQ7 364 aaPredicted RBP17.34■□□□□ 0.37
RER1-209ENST00000605895 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.34■□□□□ 0.37
RER1-209ENST00000605895 MMP1P03956 469 aa17.33■□□□□ 0.37
RER1-209ENST00000605895 MMP14P50281 582 aa17.33■□□□□ 0.37
RER1-209ENST00000605895 PPP2R5AQ15172 486 aa17.33■□□□□ 0.37
RER1-209ENST00000605895 TTF1Q15361 905 aaPredicted RBP17.33■□□□□ 0.37
RER1-209ENST00000605895 CDKAL1Q5VV42 579 aa17.33■□□□□ 0.37
RER1-209ENST00000605895 SYNE4Q8N205 404 aa17.33■□□□□ 0.37
RER1-209ENST00000605895 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.37
RER1-209ENST00000605895 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.36
RER1-209ENST00000605895 SMIM22K7EJ46 135 aa17.33■□□□□ 0.36
RER1-209ENST00000605895 RDXP35241 583 aaKnown RBP17.33■□□□□ 0.36
RER1-209ENST00000605895 IL15P40933 162 aaPredicted RBP17.33■□□□□ 0.36
RER1-209ENST00000605895 TSR1Q2NL82 804 aaKnown RBP17.33■□□□□ 0.36
RER1-209ENST00000605895 NELFBQ8WX92 580 aa17.33■□□□□ 0.36
RER1-209ENST00000605895 APPBP2Q92624 585 aa17.33■□□□□ 0.36
RER1-209ENST00000605895 CABS1Q96KC9 395 aa17.33■□□□□ 0.36
RER1-209ENST00000605895 VIPAS39Q9H9C1 493 aa17.33■□□□□ 0.36
RER1-209ENST00000605895 PLEKP08567 350 aaPredicted RBP17.32■□□□□ 0.36
RER1-209ENST00000605895 KCNA6P17658 529 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 NT5DC1Q5TFE4 455 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 N4BP2L2Q92802 583 aaPredicted RBP17.32■□□□□ 0.36
RER1-209ENST00000605895 SCLT1Q96NL6 688 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 CTAGE1Q96RT6 745 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 MLXIPQ9HAP2 919 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 LY9Q9HBG7 655 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 LUC7L2Q9Y383 392 aaKnown RBP17.32■□□□□ 0.36
RER1-209ENST00000605895 SNAP23O00161 211 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 SKAP2O75563 359 aaPredicted RBP17.32■□□□□ 0.36
RER1-209ENST00000605895 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 IGDCC4Q8TDY8 1250 aa17.32■□□□□ 0.36
RER1-209ENST00000605895 PPANQ9NQ55 473 aaKnown RBP17.32■□□□□ 0.36
RER1-209ENST00000605895 RPSAP08865 295 aaKnown RBP17.31■□□□□ 0.36
RER1-209ENST00000605895 NFRKBQ6P4R8 1299 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 PDHBP11177 359 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 TUBB2AQ13885 445 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 CCDC96Q2M329 555 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 RNPC3Q96LT9 517 aaKnown RBP17.31■□□□□ 0.36
RER1-209ENST00000605895 TUBB2BQ9BVA1 445 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 SHOX2O60902 331 aaPredicted RBP17.31■□□□□ 0.36
RER1-209ENST00000605895 NNTQ13423 1086 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 PTPROQ16827 1216 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 SRPRBQ9Y5M8 271 aaKnown RBP17.31■□□□□ 0.36
RER1-209ENST00000605895 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
RER1-209ENST00000605895 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
RER1-209ENST00000605895 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 FAM170AA1A519 330 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 NAP1L1P55209 391 aaKnown RBP17.3■□□□□ 0.36
RER1-209ENST00000605895 TRADDQ15628 312 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 TCP11X2Q5H9J9 407 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 TRIM22Q8IYM9 498 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
RER1-209ENST00000605895 OR8K1Q8NGG5 319 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 MS4A14Q96JA4 679 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 DONSONQ9NYP3 566 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 LRWD1Q9UFC0 647 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 TMEM2Q9UHN6 1383 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 B4DLN1 442 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 PRKAB2O43741 272 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
RER1-209ENST00000605895 WDR59Q6PJI9 974 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 ZKSCAN4Q969J2 545 aaPredicted RBP17.3■□□□□ 0.36
RER1-209ENST00000605895 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
RER1-209ENST00000605895 NKRFO15226 690 aaKnown RBP eCLIP17.29■□□□□ 0.363e-7■□□□□ 10
RER1-209ENST00000605895 MOCS3O95396 460 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms