RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PXYLP1Q8TE99 480 aa13.73□□□□□ -0.21
CCDC12-209ENST00000604164 SOCS4Q8WXH5 440 aa13.73□□□□□ -0.21
CCDC12-209ENST00000604164 ZNF333Q96JL9 665 aa13.73□□□□□ -0.21
CCDC12-209ENST00000604164 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
CCDC12-209ENST00000604164 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
CCDC12-209ENST00000604164 BIN2Q9UBW5 565 aaPredicted RBP13.73□□□□□ -0.21
CCDC12-209ENST00000604164 ZMYM6O95789 1325 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 A0A0D9SFI3 127 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 TSPY3P0CV98 308 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 TSPY8P0CW00 308 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 PCP11498 1178 aaKnown RBP13.72□□□□□ -0.21
CCDC12-209ENST00000604164 FLT3LGP49771 235 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 NMIQ13287 307 aaPredicted RBP13.72□□□□□ -0.21
CCDC12-209ENST00000604164 CCDC129Q6ZRS4 1044 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 STK11IPQ8N1F8 1099 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 FAM227BQ96M60 508 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 PAGR1Q9BTK6 254 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 RBPJLQ9UBG7 517 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 ANAPC4Q9UJX5 808 aa13.72□□□□□ -0.21
CCDC12-209ENST00000604164 SMIM22K7EJ46 135 aa13.71□□□□□ -0.21
CCDC12-209ENST00000604164 ADCY3O60266 1144 aa13.71□□□□□ -0.21
CCDC12-209ENST00000604164 TTLL1O95922 423 aa13.71□□□□□ -0.21
CCDC12-209ENST00000604164 CAPN2P17655 700 aa13.71□□□□□ -0.21
CCDC12-209ENST00000604164 NT5C2P49902 561 aa13.71□□□□□ -0.21
CCDC12-209ENST00000604164 SIAH1Q8IUQ4 282 aa13.71□□□□□ -0.21
CCDC12-209ENST00000604164 TRMT44Q8IYL2 757 aaKnown RBP13.71□□□□□ -0.21
CCDC12-209ENST00000604164 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.21
CCDC12-209ENST00000604164 NUDT12Q9BQG2 462 aa13.71□□□□□ -0.21
CCDC12-209ENST00000604164 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.22
CCDC12-209ENST00000604164 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
CCDC12-209ENST00000604164 RAD21O60216 631 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 PRDM1O75626 825 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 FLOT1O75955 427 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
CCDC12-209ENST00000604164 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 SPICE1Q8N0Z3 855 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 NKX2-3Q8TAU0 364 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 SH3TC2Q8TF17 1288 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 RUFY2Q8WXA3 655 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 TXNRD2Q9NNW7 524 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 MTMR4Q9NYA4 1195 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 GABRQQ9UN88 632 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 IVNS1ABPQ9Y6Y0 642 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 MGAMO43451 1857 aa13.7□□□□□ -0.22
CCDC12-209ENST00000604164 FGAP02671 866 aa13.69□□□□□ -0.22
CCDC12-209ENST00000604164 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
CCDC12-209ENST00000604164 TFAP4Q01664 338 aa13.69□□□□□ -0.22
CCDC12-209ENST00000604164 VPS53Q5VIR6 699 aa13.69□□□□□ -0.22
CCDC12-209ENST00000604164 CWC27Q6UX04 472 aaKnown RBP13.69□□□□□ -0.22
CCDC12-209ENST00000604164 PLEKHH3Q7Z736 793 aa13.69□□□□□ -0.22
CCDC12-209ENST00000604164 CLEC10AQ8IUN9 316 aa13.69□□□□□ -0.22
CCDC12-209ENST00000604164 MKL1Q969V6 931 aa13.69□□□□□ -0.22
CCDC12-209ENST00000604164 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC12-209ENST00000604164 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
CCDC12-209ENST00000604164 CLIP2Q9UDT6 1046 aa13.69□□□□□ -0.22
CCDC12-209ENST00000604164 CTNNA3Q9UI47 895 aa13.69□□□□□ -0.22
CCDC12-209ENST00000604164 IGKV6D-41A0A0C4DH26 115 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 FOXP2O15409 715 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 ORC4O43929 436 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 DSG3P32926 999 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 COPB2P35606 906 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 RGS2P41220 211 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 CENPQQ7L2Z9 268 aaPredicted RBP13.68□□□□□ -0.22
CCDC12-209ENST00000604164 GPR142Q7Z601 462 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 ZNF589Q86UQ0 364 aaPredicted RBP13.68□□□□□ -0.22
CCDC12-209ENST00000604164 SHCBP1Q8NEM2 672 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 CEP95Q96GE4 821 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 TOMM22Q9NS69 142 aa13.68□□□□□ -0.22
CCDC12-209ENST00000604164 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC12-209ENST00000604164 RAD50Q92878 1312 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 ZSWIM8A7E2V4 1837 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 SLC15A5A6NIM6 579 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 F5H6K3 240 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 ZNF213O14771 459 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 STRNO43815 780 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 RANBP6O60518 1105 aaKnown RBP13.67□□□□□ -0.22
CCDC12-209ENST00000604164 HMGCRP04035 888 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 PDE4AP27815 886 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 CTDSPL2Q05D32 466 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 KLRC3Q07444 240 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 Q3C1V9 767 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 WDR78Q5VTH9 848 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 MFSD6Q6ZSS7 791 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 GMCL1P1Q8NEA9 526 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 GJD2Q9UKL4 321 aa13.67□□□□□ -0.22
CCDC12-209ENST00000604164 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
CCDC12-209ENST00000604164 CNMDO75829 334 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 SLC25A27O95847 323 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 NDUFB10O96000 172 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 INHAP05111 366 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 NEFLP07196 543 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 FGRP09769 529 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 CCL5P13501 91 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 FAM47AQ5JRC9 791 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 KIAA1755Q5JYT7 1200 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms