RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 RPAP3Q9H6T3 665 aaPredicted RBP28.26■■■□□ 2.11
SSX2IP-209ENST00000603677 GOPCQ9HD26 462 aa28.26■■■□□ 2.11
SSX2IP-209ENST00000603677 ZSWIM8A7E2V4 1837 aa28.26■■■□□ 2.11
SSX2IP-209ENST00000603677 PRKCZQ05513 592 aa28.25■■■□□ 2.11
SSX2IP-209ENST00000603677 MB21D1Q8N884 522 aa28.25■■■□□ 2.11
SSX2IP-209ENST00000603677 SMIM22K7EJ46 135 aa28.24■■■□□ 2.11
SSX2IP-209ENST00000603677 EEF2P13639 858 aaKnown RBP28.24■■■□□ 2.11
SSX2IP-209ENST00000603677 PLIN4Q96Q06 1357 aa28.24■■■□□ 2.11
SSX2IP-209ENST00000603677 PCP11498 1178 aaKnown RBP28.23■■■□□ 2.11
SSX2IP-209ENST00000603677 FLT3LGP49771 235 aa28.23■■■□□ 2.11
SSX2IP-209ENST00000603677 UBXN2AP68543 259 aa28.23■■■□□ 2.11
SSX2IP-209ENST00000603677 SOCS4Q8WXH5 440 aa28.23■■■□□ 2.11
SSX2IP-209ENST00000603677 MKL1Q969V6 931 aa28.23■■■□□ 2.11
SSX2IP-209ENST00000603677 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.23■■■□□ 2.11
SSX2IP-209ENST00000603677 CCDC171Q6TFL3 1326 aa28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 A0A0D9SFI3 127 aa28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 FOXP2O15409 715 aa28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 SOX10P56693 466 aa28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 IRX6P78412 446 aaPredicted RBP28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 CCAR1Q8IX12 1150 aaKnown RBP28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 DOCK3Q8IZD9 2030 aa28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 NEDD1Q8NHV4 660 aa28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 FAM227BQ96M60 508 aa28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 TXNRD2Q9NNW7 524 aa28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 KIAA0100Q14667 2235 aaKnown RBP28.22■■■□□ 2.11
SSX2IP-209ENST00000603677 IGKV6D-41A0A0C4DH26 115 aa28.21■■■□□ 2.11
SSX2IP-209ENST00000603677 FGRP09769 529 aa28.21■■■□□ 2.11
SSX2IP-209ENST00000603677 HSPD1P10809 573 aaKnown RBP28.21■■■□□ 2.11
SSX2IP-209ENST00000603677 NMIQ13287 307 aaPredicted RBP28.21■■■□□ 2.11
SSX2IP-209ENST00000603677 CCDC129Q6ZRS4 1044 aa28.21■■■□□ 2.11
SSX2IP-209ENST00000603677 TRMT44Q8IYL2 757 aaKnown RBP28.21■■■□□ 2.11
SSX2IP-209ENST00000603677 DIAPH3Q9NSV4 1193 aa28.21■■■□□ 2.11
SSX2IP-209ENST00000603677 CENPFP49454 3210 aa28.21■■■□□ 2.11
SSX2IP-209ENST00000603677 SPDYE16A6NNV3 312 aaPredicted RBP28.2■■■□□ 2.1
SSX2IP-209ENST00000603677 ADCY3O60266 1144 aa28.2■■■□□ 2.1
SSX2IP-209ENST00000603677 TSPY3P0CV98 308 aa28.2■■■□□ 2.1
SSX2IP-209ENST00000603677 TSPY8P0CW00 308 aa28.2■■■□□ 2.1
SSX2IP-209ENST00000603677 XRCC5P13010 732 aaKnown RBP28.2■■■□□ 2.1
SSX2IP-209ENST00000603677 TANGO6Q9C0B7 1094 aa28.2■■■□□ 2.1
SSX2IP-209ENST00000603677 GJD2Q9UKL4 321 aa28.2■■■□□ 2.1
SSX2IP-209ENST00000603677 GABRQQ9UN88 632 aa28.2■■■□□ 2.1
SSX2IP-209ENST00000603677 TTLL1O95922 423 aa28.19■■■□□ 2.1
SSX2IP-209ENST00000603677 FGAP02671 866 aa28.19■■■□□ 2.1
SSX2IP-209ENST00000603677 NKX2-3Q8TAU0 364 aa28.19■■■□□ 2.1
SSX2IP-209ENST00000603677 NUDT12Q9BQG2 462 aa28.19■■■□□ 2.1
SSX2IP-209ENST00000603677 MTMR4Q9NYA4 1195 aa28.19■■■□□ 2.1
SSX2IP-209ENST00000603677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.19■■■□□ 2.1
SSX2IP-209ENST00000603677 ORC4O43929 436 aa28.18■■■□□ 2.1
SSX2IP-209ENST00000603677 DSG3P32926 999 aa28.18■■■□□ 2.1
SSX2IP-209ENST00000603677 Q3C1V9 767 aa28.18■■■□□ 2.1
SSX2IP-209ENST00000603677 TTC22Q5TAA0 569 aa28.18■■■□□ 2.1
SSX2IP-209ENST00000603677 VPS53Q5VIR6 699 aa28.18■■■□□ 2.1
SSX2IP-209ENST00000603677 SH3TC2Q8TF17 1288 aa28.18■■■□□ 2.1
SSX2IP-209ENST00000603677 PAGR1Q9BTK6 254 aa28.18■■■□□ 2.1
SSX2IP-209ENST00000603677 ATP2B2Q01814 1243 aa28.17■■■□□ 2.1
SSX2IP-209ENST00000603677 SHCBP1Q8NEM2 672 aa28.17■■■□□ 2.1
SSX2IP-209ENST00000603677 ADAMTS5Q9UNA0 930 aa28.17■■■□□ 2.1
SSX2IP-209ENST00000603677 RLFQ13129 1914 aa28.16■■■□□ 2.1
SSX2IP-209ENST00000603677 STRNO43815 780 aa28.16■■■□□ 2.1
SSX2IP-209ENST00000603677 PDE4AP27815 886 aa28.16■■■□□ 2.1
SSX2IP-209ENST00000603677 POTEEQ6S8J3 1075 aa28.16■■■□□ 2.1
SSX2IP-209ENST00000603677 PLEKHH3Q7Z736 793 aa28.16■■■□□ 2.1
SSX2IP-209ENST00000603677 GMCL1P1Q8NEA9 526 aa28.16■■■□□ 2.1
SSX2IP-209ENST00000603677 PRDM1O75626 825 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 CNMDO75829 334 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 FLOT1O75955 427 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 TFAP4Q01664 338 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 KIAA1755Q5JYT7 1200 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 GPR142Q7Z601 462 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 ZNF589Q86UQ0 364 aaPredicted RBP28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 CLEC10AQ8IUN9 316 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 CEP95Q96GE4 821 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 BIN2Q9UBW5 565 aaPredicted RBP28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 CLIP2Q9UDT6 1046 aa28.15■■■□□ 2.1
SSX2IP-209ENST00000603677 F5H6K3 240 aa28.14■■■□□ 2.1
SSX2IP-209ENST00000603677 ECM2O94769 699 aaPredicted RBP28.14■■■□□ 2.1
SSX2IP-209ENST00000603677 KLRC3Q07444 240 aa28.14■■■□□ 2.1
SSX2IP-209ENST00000603677 STK11IPQ8N1F8 1099 aa28.14■■■□□ 2.1
SSX2IP-209ENST00000603677 DSCC1Q9BVC3 393 aa28.14■■■□□ 2.1
SSX2IP-209ENST00000603677 RNF41Q9H4P4 317 aaPredicted RBP28.14■■■□□ 2.1
SSX2IP-209ENST00000603677 A0A0G2JMZ2 1700 aa28.14■■■□□ 2.1
SSX2IP-209ENST00000603677 MYH4Q9Y623 1939 aa28.14■■■□□ 2.09
SSX2IP-209ENST00000603677 TSPY2A6NKD2 308 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 COPB2P35606 906 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 CWC27Q6UX04 472 aaKnown RBP28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 SPICE1Q8N0Z3 855 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 RUFY2Q8WXA3 655 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 USP6NLQ92738 828 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 PORCNQ9H237 461 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 CWC22Q9HCG8 908 aaKnown RBP28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 BTBD7Q9P203 1132 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 IVNS1ABPQ9Y6Y0 642 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 RAD50Q92878 1312 aa28.13■■■□□ 2.09
SSX2IP-209ENST00000603677 SLC15A5A6NIM6 579 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 HMGCRP04035 888 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 GJB1P08034 283 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 FDX1P10109 184 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 RGS2P41220 211 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 NOVP48745 357 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 MORN1Q5T089 497 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms