RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 CCAR1Q8IX12 1150 aaKnown RBP26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 TANGO6Q9C0B7 1094 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 VCPKMTQ9H867 229 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 BIN2Q9UBW5 565 aaPredicted RBP26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 RABGAP1Q9Y3P9 1069 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 DOCK3Q8IZD9 2030 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 PDE4BQ07343 736 aa26.06■■□□□ 1.76
PPFIA3-208ENST00000602726 IRF5Q13568 498 aa26.06■■□□□ 1.76
PPFIA3-208ENST00000602726 VPS53Q5VIR6 699 aa26.06■■□□□ 1.76
PPFIA3-208ENST00000602726 SPICE1Q8N0Z3 855 aa26.06■■□□□ 1.76
PPFIA3-208ENST00000602726 SLAIN1Q8ND83 568 aa26.06■■□□□ 1.76
PPFIA3-208ENST00000602726 POTEFA5A3E0 1075 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 FOXP2O15409 715 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 ADCY3O60266 1144 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 SDSP20132 328 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 COG2Q14746 738 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 Q3C1V9 767 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 KIAA1755Q5JYT7 1200 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 POTEEQ6S8J3 1075 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 HOXC10Q9NYD6 342 aa26.05■■□□□ 1.76
PPFIA3-208ENST00000602726 MAPK4P31152 587 aa26.04■■□□□ 1.76
PPFIA3-208ENST00000602726 LBX2Q6XYB7 198 aa26.04■■□□□ 1.76
PPFIA3-208ENST00000602726 GOPCQ9HD26 462 aa26.04■■□□□ 1.76
PPFIA3-208ENST00000602726 SPDYE16A6NNV3 312 aaPredicted RBP26.03■■□□□ 1.76
PPFIA3-208ENST00000602726 RAD21O60216 631 aa26.03■■□□□ 1.76
PPFIA3-208ENST00000602726 UBXN2AP68543 259 aa26.03■■□□□ 1.76
PPFIA3-208ENST00000602726 CCNA1P78396 465 aa26.03■■□□□ 1.76
PPFIA3-208ENST00000602726 PXYLP1Q8TE99 480 aa26.03■■□□□ 1.76
PPFIA3-208ENST00000602726 WDR46O15213 610 aaKnown RBP26.02■■□□□ 1.76
PPFIA3-208ENST00000602726 CNMDO75829 334 aa26.02■■□□□ 1.76
PPFIA3-208ENST00000602726 ELNP15502 786 aa26.02■■□□□ 1.76
PPFIA3-208ENST00000602726 PDE4AP27815 886 aa26.02■■□□□ 1.76
PPFIA3-208ENST00000602726 ALX1Q15699 326 aa26.02■■□□□ 1.76
PPFIA3-208ENST00000602726 CWC22Q9HCG8 908 aaKnown RBP26.02■■□□□ 1.76
PPFIA3-208ENST00000602726 DIAPH3Q9NSV4 1193 aa26.02■■□□□ 1.76
PPFIA3-208ENST00000602726 NYAP2Q9P242 653 aa26.02■■□□□ 1.76
PPFIA3-208ENST00000602726 HIP1O00291 1037 aa26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 FLOT1O75955 427 aa26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 TSPY3P0CV98 308 aa26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 TSPY8P0CW00 308 aa26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 MFAP1P55081 439 aaKnown RBP26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 CCDC171Q6TFL3 1326 aa26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 ZNF589Q86UQ0 364 aaPredicted RBP26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 PORCNQ9H237 461 aa26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 GJD2Q9UKL4 321 aa26.01■■□□□ 1.75
PPFIA3-208ENST00000602726 GREB1LQ9C091 1923 aaPredicted RBP26■■□□□ 1.75
PPFIA3-208ENST00000602726 HSPD1P10809 573 aaKnown RBP26■■□□□ 1.75
PPFIA3-208ENST00000602726 CTDSPL2Q05D32 466 aa26■■□□□ 1.75
PPFIA3-208ENST00000602726 MTFR1Q15390 333 aa26■■□□□ 1.75
PPFIA3-208ENST00000602726 BTBD7Q9P203 1132 aa26■■□□□ 1.75
PPFIA3-208ENST00000602726 CLIP2Q9UDT6 1046 aa26■■□□□ 1.75
PPFIA3-208ENST00000602726 IGKV6D-41A0A0C4DH26 115 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 FGAP02671 866 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 EN2P19622 333 aaPredicted RBP25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 DSG3P32926 999 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 TFAP4Q01664 338 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 FAM47AQ5JRC9 791 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 CWC27Q6UX04 472 aaKnown RBP25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 GPR142Q7Z601 462 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 PLEKHH3Q7Z736 793 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 NEDD1Q8NHV4 660 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 SOCS4Q8WXH5 440 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 CEP95Q96GE4 821 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 NUDT12Q9BQG2 462 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 ANAPC4Q9UJX5 808 aa25.99■■□□□ 1.75
PPFIA3-208ENST00000602726 RBBP6Q7Z6E9 1792 aaKnown RBP25.98■■□□□ 1.75
PPFIA3-208ENST00000602726 CCL5P13501 91 aa25.98■■□□□ 1.75
PPFIA3-208ENST00000602726 WDR78Q5VTH9 848 aa25.98■■□□□ 1.75
PPFIA3-208ENST00000602726 SAMD1Q6SPF0 538 aaPredicted RBP25.98■■□□□ 1.75
PPFIA3-208ENST00000602726 MTMR4Q9NYA4 1195 aa25.98■■□□□ 1.75
PPFIA3-208ENST00000602726 TTLL1O95922 423 aa25.97■■□□□ 1.75
PPFIA3-208ENST00000602726 INHAP05111 366 aa25.97■■□□□ 1.75
PPFIA3-208ENST00000602726 TTC22Q5TAA0 569 aa25.97■■□□□ 1.75
PPFIA3-208ENST00000602726 MB21D1Q8N884 522 aa25.97■■□□□ 1.75
PPFIA3-208ENST00000602726 RNF208Q9H0X6 261 aa25.97■■□□□ 1.75
PPFIA3-208ENST00000602726 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.97■■□□□ 1.75
PPFIA3-208ENST00000602726 PLIN4Q96Q06 1357 aa25.96■■□□□ 1.75
PPFIA3-208ENST00000602726 F5H6K3 240 aa25.96■■□□□ 1.75
PPFIA3-208ENST00000602726 CYP2B6P20813 491 aa25.96■■□□□ 1.75
PPFIA3-208ENST00000602726 KLRC3Q07444 240 aa25.96■■□□□ 1.75
PPFIA3-208ENST00000602726 FAM83BQ5T0W9 1011 aa25.96■■□□□ 1.75
PPFIA3-208ENST00000602726 ATG4CQ96DT6 458 aa25.96■■□□□ 1.75
PPFIA3-208ENST00000602726 INCENPQ9NQS7 918 aa25.96■■□□□ 1.75
PPFIA3-208ENST00000602726 ZMYM6O95789 1325 aa25.95■■□□□ 1.75
PPFIA3-208ENST00000602726 TSPY2A6NKD2 308 aa25.95■■□□□ 1.74
PPFIA3-208ENST00000602726 TNRC18O15417 2968 aaPredicted RBP25.95■■□□□ 1.74
PPFIA3-208ENST00000602726 MKL1Q969V6 931 aa25.95■■□□□ 1.74
PPFIA3-208ENST00000602726 RLFQ13129 1914 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 BRCA2P51587 3418 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 RANBP6O60518 1105 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 NDUFB10O96000 172 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 GSPT1P15170 499 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 PLS1Q14651 629 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 PPP4R3BQ5MIZ7 849 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 SPATC1LQ9H0A9 340 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 UNC93B1Q9H1C4 597 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 TOMM22Q9NS69 142 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 FBXO28Q9NVF7 368 aa25.94■■□□□ 1.74
PPFIA3-208ENST00000602726 SYNPO2Q9UMS6 1093 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms