RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 KAT14Q9H8E8 782 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 VCX3AQ9NNX9 186 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 CEP131Q9UPN4 1083 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 EFR3BQ9Y2G0 817 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 C2CD2Q9Y426 696 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 TIMM22Q9Y584 194 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 CARMIL2Q6F5E8 1435 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
COMMD3-215ENST00000602574 WDHD1O75717 1129 aaPredicted RBP9.89□□□□□ -0.83
COMMD3-215ENST00000602574 DNAJC8O75937 253 aaPredicted RBP9.89□□□□□ -0.83
COMMD3-215ENST00000602574 SYF2O95926 243 aaKnown RBP9.89□□□□□ -0.83
COMMD3-215ENST00000602574 ENDOUP21128 410 aaKnown RBP9.89□□□□□ -0.83
COMMD3-215ENST00000602574 PMS2P54278 862 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 GSTM4Q03013 218 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 SEPT7Q16181 437 aaKnown RBP9.89□□□□□ -0.83
COMMD3-215ENST00000602574 CCDC122Q5T0U0 273 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 CHD1LQ86WJ1 897 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 ERICH1Q86X53 443 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 STK11IPQ8N1F8 1099 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 ZNF570Q96NI8 536 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 NR1H4Q96RI1 486 aaPredicted RBP9.89□□□□□ -0.83
COMMD3-215ENST00000602574 TNMDQ9H2S6 317 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 CENPHQ9H3R5 247 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 SHPRHQ149N8 1683 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 HTR3EA5X5Y0 456 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 ACTN4O43707 911 aaKnown RBP9.88□□□□□ -0.83
COMMD3-215ENST00000602574 CYTH3O43739 400 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 HSPA8P11142 646 aaKnown RBP9.88□□□□□ -0.83
COMMD3-215ENST00000602574 S100A5P33763 92 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 GUCY1B3Q02153 619 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 MAP3K11Q16584 847 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 NEPROQ6NW34 567 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 TMEM53Q6P2H8 277 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 GIMAP6Q6P9H5 292 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 POTEEQ6S8J3 1075 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 CCDC121Q6ZUS5 278 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 IRGQQ8WZA9 623 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 SH3GL2Q99962 352 aa9.88□□□□□ -0.83
COMMD3-215ENST00000602574 NDUFAB1O14561 156 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 URI1O94763 535 aaPredicted RBP9.87□□□□□ -0.83
COMMD3-215ENST00000602574 RAPGEF3O95398 923 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 ATP6V1G2O95670 118 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 FGFR1OPO95684 399 aaKnown RBP9.87□□□□□ -0.83
COMMD3-215ENST00000602574 SKIP12755 728 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 IL4RP24394 825 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 MYO1EQ12965 1108 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 CCDC153Q494R4 210 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 ACCSLQ4AC99 568 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 LACTB2Q53H82 288 aaPredicted RBP9.87□□□□□ -0.83
COMMD3-215ENST00000602574 AGAP9Q5VTM2 703 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 ZNF804AQ7Z570 1209 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 ZNF554Q86TJ5 538 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 C11orf74Q86VG3 221 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 EXOC3L1Q86VI1 746 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 GDAP1Q8TB36 358 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 ATP6V0A1Q93050 837 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 NDNQ99608 321 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 DHX36Q9H2U1 1008 aaKnown RBP9.87□□□□□ -0.83
COMMD3-215ENST00000602574 ATP6V1DQ9Y5K8 247 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 GOLGA6L10A0A0M3HER8 536 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 BECN2A8MW95 431 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 TTC34A8MYJ7 566 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 CCNCP24863 283 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 PRKAR2BP31323 418 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 MXRA7P84157 204 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 MVPQ14764 893 aaKnown RBP9.87□□□□□ -0.83
COMMD3-215ENST00000602574 CCDC14Q49A88 953 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 C6orf89Q6UWU4 347 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 ESX1Q8N693 406 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 DYDC1Q8WWB3 177 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 ABHD8Q96I13 439 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 L3MBTL3Q96JM7 780 aaPredicted RBP9.87□□□□□ -0.83
COMMD3-215ENST00000602574 CTAGE1Q96RT6 745 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 OSBPL1AQ9BXW6 950 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 NOD2Q9HC29 1040 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.87□□□□□ -0.83
COMMD3-215ENST00000602574 KIF24Q5T7B8 1368 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 PLA2R1Q13018 1463 aa9.87□□□□□ -0.83
COMMD3-215ENST00000602574 AKR1B10O60218 316 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 GHRP10912 638 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 LMNB1P20700 586 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 S100A1P23297 94 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 KIF5BP33176 963 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 BPIFB4P59827 614 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 CDK17Q00537 523 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 DMPKQ09013 629 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 GNL2Q13823 731 aaKnown RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 TRIM71Q2Q1W2 868 aaKnown RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 PLPP6Q8IY26 295 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 IGSF22Q8N9C0 903 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 NCSTNQ92542 709 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 C2orf49Q9BVC5 232 aaPredicted RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 CLK4Q9HAZ1 481 aaKnown RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 KIAA1468Q9P260 1216 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 CTNNAL1Q9UBT7 734 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 PCSK1NQ9UHG2 260 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 R3HDM2Q9Y2K5 976 aaKnown RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 NSD2O96028 1365 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 SBNO2Q9Y2G9 1366 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms