RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 PMS1P54277 932 aaKnown RBP11.2□□□□□ -0.62
SGMS1-206ENST00000602565 SLC7A5Q01650 507 aa11.2□□□□□ -0.62
SGMS1-206ENST00000602565 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
SGMS1-206ENST00000602565 VHLLQ6RSH7 139 aa11.2□□□□□ -0.62
SGMS1-206ENST00000602565 RNF141Q8WVD5 230 aa11.2□□□□□ -0.62
SGMS1-206ENST00000602565 DDR2Q16832 855 aa11.19□□□□□ -0.62
SGMS1-206ENST00000602565 TDRD10Q5VZ19 366 aaKnown RBP11.19□□□□□ -0.62
SGMS1-206ENST00000602565 SHISA5Q8N114 240 aa11.19□□□□□ -0.62
SGMS1-206ENST00000602565 ZNF512BQ96KM6 892 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-206ENST00000602565 ASPNQ9BXN1 380 aa11.19□□□□□ -0.62
SGMS1-206ENST00000602565 OSBPL2Q9H1P3 480 aa11.19□□□□□ -0.62
SGMS1-206ENST00000602565 FAM86C1Q9NVL1 165 aa11.19□□□□□ -0.62
SGMS1-206ENST00000602565 SIRPGQ9P1W8 387 aa11.19□□□□□ -0.62
SGMS1-206ENST00000602565 ZNF214Q9UL59 606 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-206ENST00000602565 PCDHB10Q9UN67 800 aa11.19□□□□□ -0.62
SGMS1-206ENST00000602565 GNAT3A8MTJ3 354 aa11.18□□□□□ -0.62
SGMS1-206ENST00000602565 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
SGMS1-206ENST00000602565 CCDC144CPQ8IYA2 1237 aa11.18□□□□□ -0.62
SGMS1-206ENST00000602565 CELF2-AS1Q8N7Q2 184 aa11.18□□□□□ -0.62
SGMS1-206ENST00000602565 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
SGMS1-206ENST00000602565 CBX7O95931 251 aa11.17□□□□□ -0.62
SGMS1-206ENST00000602565 NCAPHQ15003 741 aa11.17□□□□□ -0.62
SGMS1-206ENST00000602565 CPSF6Q16630 551 aaKnown RBP eCLIP11.17□□□□□ -0.62
SGMS1-206ENST00000602565 C6orf15Q6UXA7 325 aaPredicted RBP11.17□□□□□ -0.62
SGMS1-206ENST00000602565 FAM178BQ8IXR5 827 aa11.17□□□□□ -0.62
SGMS1-206ENST00000602565 LRRC4CQ9HCJ2 640 aa11.17□□□□□ -0.62
SGMS1-206ENST00000602565 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
SGMS1-206ENST00000602565 TP53P04637 393 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-206ENST00000602565 FURINP09958 794 aa11.16□□□□□ -0.62
SGMS1-206ENST00000602565 KIR3DL1P43629 444 aa11.16□□□□□ -0.62
SGMS1-206ENST00000602565 NBPF12Q5TAG4 269 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-206ENST00000602565 KIAA1211LQ6NV74 962 aa11.16□□□□□ -0.62
SGMS1-206ENST00000602565 KCNH3Q9ULD8 1083 aa11.16□□□□□ -0.62
SGMS1-206ENST00000602565 LEMD3Q9Y2U8 911 aa11.16□□□□□ -0.62
SGMS1-206ENST00000602565 B2RBV5 119 aa11.15□□□□□ -0.62
SGMS1-206ENST00000602565 PPFIBP1Q86W92 1011 aa11.15□□□□□ -0.62
SGMS1-206ENST00000602565 ZSWIM4Q9H7M6 989 aa11.15□□□□□ -0.62
SGMS1-206ENST00000602565 IGF2BP3O00425 579 aaKnown RBP eCLIP11.14□□□□□ -0.63
SGMS1-206ENST00000602565 GJB6O95452 261 aa11.14□□□□□ -0.63
SGMS1-206ENST00000602565 CCDC144BQ3MJ40 725 aa11.14□□□□□ -0.63
SGMS1-206ENST00000602565 FBXL18Q96ME1 805 aa11.14□□□□□ -0.63
SGMS1-206ENST00000602565 HEXIM2Q96MH2 286 aaKnown RBP11.14□□□□□ -0.63
SGMS1-206ENST00000602565 C9IYK1 514 aa11.13□□□□□ -0.63
SGMS1-206ENST00000602565 SERINC3Q13530 473 aa11.13□□□□□ -0.63
SGMS1-206ENST00000602565 NFE2L2Q16236 605 aa11.13□□□□□ -0.63
SGMS1-206ENST00000602565 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
SGMS1-206ENST00000602565 MFSD4AQ8N468 514 aa11.13□□□□□ -0.63
SGMS1-206ENST00000602565 MICAL1Q8TDZ2 1067 aa11.13□□□□□ -0.63
SGMS1-206ENST00000602565 SRPK1Q96SB4 655 aaKnown RBP11.13□□□□□ -0.63
SGMS1-206ENST00000602565 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
SGMS1-206ENST00000602565 FAM155AB1AL88 458 aaPredicted RBP11.12□□□□□ -0.63
SGMS1-206ENST00000602565 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
SGMS1-206ENST00000602565 CYP26A1O43174 497 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 ITIH2P19823 946 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 BMS1Q14692 1282 aaKnown RBP11.12□□□□□ -0.63
SGMS1-206ENST00000602565 ZDHHC13Q8IUH4 622 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 FAM181AQ8N9Y4 354 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 KLHL6Q8WZ60 621 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
SGMS1-206ENST00000602565 PIM2Q9P1W9 311 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 FBXL21Q9UKT6 434 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 PCDHB12Q9Y5F1 795 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 CNTNAP4Q9C0A0 1308 aa11.12□□□□□ -0.63
SGMS1-206ENST00000602565 TLDC2A0PJX2 215 aa11.11□□□□□ -0.63
SGMS1-206ENST00000602565 NAT2P11245 290 aa11.11□□□□□ -0.63
SGMS1-206ENST00000602565 HEATR6Q6AI08 1181 aaKnown RBP11.11□□□□□ -0.63
SGMS1-206ENST00000602565 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
SGMS1-206ENST00000602565 VWCEQ96DN2 955 aa11.11□□□□□ -0.63
SGMS1-206ENST00000602565 LRRN2O75325 713 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 ZNF865P0CJ78 1059 aaPredicted RBP11.1□□□□□ -0.63
SGMS1-206ENST00000602565 AUHQ13825 339 aaKnown RBP11.1□□□□□ -0.63
SGMS1-206ENST00000602565 PRSS36Q5K4E3 855 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 AXDND1Q5T1B0 1012 aaPredicted RBP11.1□□□□□ -0.63
SGMS1-206ENST00000602565 DCAF15Q66K64 600 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 EEPD1Q7L9B9 569 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 MKL1Q969V6 931 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 MRFAP1L1Q96HT8 127 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 DEPDC7Q96QD5 511 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 HAUS7Q99871 368 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 MKNK2Q9HBH9 465 aa11.1□□□□□ -0.63
SGMS1-206ENST00000602565 COL17A1Q9UMD9 1497 aaPredicted RBP11.1□□□□□ -0.63
SGMS1-206ENST00000602565 PRR33A8MZF0 331 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 TCEAL1Q15170 157 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 DTWD2Q8NBA8 298 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 GBP3Q9H0R5 595 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 CEACAM5P06731 702 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 OXCT1P55809 520 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 IFRD2Q12894 506 aaPredicted RBP11.09□□□□□ -0.63
SGMS1-206ENST00000602565 NBPF9Q3BBW0 867 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 C7orf61Q8IZ16 206 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 Q96M66 194 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 CCDC113Q9H0I3 377 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 SNTG2Q9NY99 539 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 CAPN6Q9Y6Q1 641 aa11.09□□□□□ -0.63
SGMS1-206ENST00000602565 EPHX1P07099 455 aa11.08□□□□□ -0.64
SGMS1-206ENST00000602565 TNK2Q07912 1038 aa11.08□□□□□ -0.64
SGMS1-206ENST00000602565 ADAT2Q7Z6V5 191 aaKnown RBP11.08□□□□□ -0.64
SGMS1-206ENST00000602565 PIWIL2Q8TC59 973 aaKnown RBP11.08□□□□□ -0.64
SGMS1-206ENST00000602565 MSRB2Q9Y3D2 182 aa11.08□□□□□ -0.64
SGMS1-206ENST00000602565 ANKRD34BA5PLL1 514 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms