RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 ZNF236Q9UL36 1845 aa17.33■□□□□ 0.37
HCG18-245ENST00000602550 EYSQ5T1H1 3165 aa17.33■□□□□ 0.37
HCG18-245ENST00000602550 PNMA6EA0A0J9YXQ4 647 aa17.33■□□□□ 0.36
HCG18-245ENST00000602550 ZAP70P43403 619 aa17.33■□□□□ 0.36
HCG18-245ENST00000602550 TLE2Q04725 743 aa17.33■□□□□ 0.36
HCG18-245ENST00000602550 TMED8Q6PL24 325 aaPredicted RBP17.33■□□□□ 0.36
HCG18-245ENST00000602550 SH3RF1Q7Z6J0 888 aa17.33■□□□□ 0.36
HCG18-245ENST00000602550 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
HCG18-245ENST00000602550 RNPC3Q96LT9 517 aaKnown RBP17.33■□□□□ 0.36
HCG18-245ENST00000602550 DBNDD2Q9BQY9 259 aa17.33■□□□□ 0.36
HCG18-245ENST00000602550 SPATC1LQ9H0A9 340 aa17.33■□□□□ 0.36
HCG18-245ENST00000602550 ZNFX1Q9P2E3 1918 aaKnown RBP17.32■□□□□ 0.36
HCG18-245ENST00000602550 ERCC3P19447 782 aa17.32■□□□□ 0.36
HCG18-245ENST00000602550 ABRAQ8N0Z2 381 aa17.32■□□□□ 0.36
HCG18-245ENST00000602550 MB21D1Q8N884 522 aa17.32■□□□□ 0.36
HCG18-245ENST00000602550 MROH8Q9H579 483 aa17.32■□□□□ 0.36
HCG18-245ENST00000602550 PIH1D3Q9NQM4 214 aaKnown RBP17.32■□□□□ 0.36
HCG18-245ENST00000602550 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.31■□□□□ 0.36
HCG18-245ENST00000602550 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.31■□□□□ 0.36
HCG18-245ENST00000602550 COBLO75128 1261 aa17.31■□□□□ 0.36
HCG18-245ENST00000602550 IDH1O75874 414 aaKnown RBP17.31■□□□□ 0.36
HCG18-245ENST00000602550 CLTBP09497 229 aa17.31■□□□□ 0.36
HCG18-245ENST00000602550 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
HCG18-245ENST00000602550 OS9Q13438 667 aaPredicted RBP17.31■□□□□ 0.36
HCG18-245ENST00000602550 NRBP1Q9UHY1 535 aa17.31■□□□□ 0.36
HCG18-245ENST00000602550 PHF24Q9UPV7 400 aa17.31■□□□□ 0.36
HCG18-245ENST00000602550 TNFRSF10AO00220 468 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 IPO8O15397 1037 aaKnown RBP17.3■□□□□ 0.36
HCG18-245ENST00000602550 RAG1P15918 1043 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 COL9A1P20849 921 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 SHMT1P34896 483 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 PRAMEF19Q5SWL8 479 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 RNF180Q86T96 592 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 MIGA1Q8NAN2 632 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 TANGO6Q9C0B7 1094 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 CDH23Q9H251 3354 aa17.3■□□□□ 0.36
HCG18-245ENST00000602550 KIAA0355O15063 1070 aa17.29■□□□□ 0.36
HCG18-245ENST00000602550 RARBP10826 455 aa17.29■□□□□ 0.36
HCG18-245ENST00000602550 GUCY1A2P33402 732 aa17.29■□□□□ 0.36
HCG18-245ENST00000602550 SEPT2Q15019 361 aa17.29■□□□□ 0.36
HCG18-245ENST00000602550 FAM47AQ5JRC9 791 aa17.29■□□□□ 0.36
HCG18-245ENST00000602550 MAML3Q96JK9 1138 aa17.29■□□□□ 0.36
HCG18-245ENST00000602550 XPNPEP3Q9NQH7 507 aa17.29■□□□□ 0.36
HCG18-245ENST00000602550 POLR3DP05423 398 aaPredicted RBP17.28■□□□□ 0.36
HCG18-245ENST00000602550 FCER1AP12319 257 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 ITGB8P26012 769 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 DSG3P32926 999 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 PLCD1P51178 756 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 FPGSQ05932 587 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 PLS1Q14651 629 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 GRIN2CQ14957 1233 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 NCAPG2Q86XI2 1143 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 TMEM39AQ9NV64 488 aa17.28■□□□□ 0.36
HCG18-245ENST00000602550 MPHOSPH10O00566 681 aaKnown RBP17.27■□□□□ 0.36
HCG18-245ENST00000602550 SURF6O75683 361 aaKnown RBP17.27■□□□□ 0.36
HCG18-245ENST00000602550 DNAJB2P25686 324 aa17.27■□□□□ 0.36
HCG18-245ENST00000602550 EPHB4P54760 987 aa17.27■□□□□ 0.36
HCG18-245ENST00000602550 POLA2Q14181 598 aa17.27■□□□□ 0.36
HCG18-245ENST00000602550 TOX2Q96NM4 488 aa17.27■□□□□ 0.36
HCG18-245ENST00000602550 ZNF576Q9H609 170 aa17.27■□□□□ 0.36
HCG18-245ENST00000602550 A0A1W2PRG0 241 aa17.26■□□□□ 0.35
HCG18-245ENST00000602550 PQBP1O60828 265 aaKnown RBP17.26■□□□□ 0.35
HCG18-245ENST00000602550 SLC25A27O95847 323 aa17.26■□□□□ 0.35
HCG18-245ENST00000602550 GABPAQ06546 454 aa17.26■□□□□ 0.35
HCG18-245ENST00000602550 SSH3Q8TE77 659 aa17.26■□□□□ 0.35
HCG18-245ENST00000602550 DBNLQ9UJU6 430 aaKnown RBP17.26■□□□□ 0.35
HCG18-245ENST00000602550 DCDC2CA8MYV0 355 aa17.25■□□□□ 0.35
HCG18-245ENST00000602550 FLOT1O75955 427 aa17.25■□□□□ 0.35
HCG18-245ENST00000602550 ATP8B2P98198 1209 aa17.25■□□□□ 0.35
HCG18-245ENST00000602550 USP38Q8NB14 1042 aa17.25■□□□□ 0.35
HCG18-245ENST00000602550 TIFAQ96CG3 184 aa17.25■□□□□ 0.35
HCG18-245ENST00000602550 GAS2L1Q99501 681 aaPredicted RBP17.25■□□□□ 0.35
HCG18-245ENST00000602550 TSEN34Q9BSV6 310 aaKnown RBP17.25■□□□□ 0.35
HCG18-245ENST00000602550 DIS3Q9Y2L1 958 aaKnown RBP17.25■□□□□ 0.35
HCG18-245ENST00000602550 A0A0G2JMZ2 1700 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 A0A1W2PQ45 241 aaPredicted RBP17.24■□□□□ 0.35
HCG18-245ENST00000602550 A0A1W2PQY0 241 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
HCG18-245ENST00000602550 PGK1P00558 417 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 TRIM27P14373 513 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 CCDC174Q6PII3 467 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 TMEM179Q6ZVK1 233 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 ANKRD33Q7Z3H0 272 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 SLC44A5Q8NCS7 719 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 ATXN2LQ8WWM7 1075 aaKnown RBP17.24■□□□□ 0.35
HCG18-245ENST00000602550 TINF2Q9BSI4 451 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 CCDC8Q9H0W5 538 aaPredicted RBP17.24■□□□□ 0.35
HCG18-245ENST00000602550 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 ARHGEF10LQ9HCE6 1279 aa17.24■□□□□ 0.35
HCG18-245ENST00000602550 MAGEB6P1A0A0J9YX57 407 aa17.23■□□□□ 0.35
HCG18-245ENST00000602550 AKR1A1P14550 325 aa17.23■□□□□ 0.35
HCG18-245ENST00000602550 AKNAD1Q5T1N1 836 aa17.23■□□□□ 0.35
HCG18-245ENST00000602550 ATG4CQ96DT6 458 aa17.23■□□□□ 0.35
HCG18-245ENST00000602550 MMP19Q99542 508 aa17.23■□□□□ 0.35
HCG18-245ENST00000602550 RIOK1Q9BRS2 568 aaKnown RBP17.23■□□□□ 0.35
HCG18-245ENST00000602550 CRNKL1Q9BZJ0 848 aaKnown RBP17.23■□□□□ 0.35
HCG18-245ENST00000602550 STARD7Q9NQZ5 370 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms