RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 FLRT1Q9NZU1 646 aa15.88■□□□□ 0.13
RPS28-204ENST00000602140 SWAP70Q9UH65 585 aa15.88■□□□□ 0.13
RPS28-204ENST00000602140 PFASO15067 1338 aa15.88■□□□□ 0.13
RPS28-204ENST00000602140 GRB14Q14449 540 aa15.87■□□□□ 0.13
RPS28-204ENST00000602140 KIAA1755Q5JYT7 1200 aa15.87■□□□□ 0.13
RPS28-204ENST00000602140 C20orf194Q5TEA3 1177 aa15.87■□□□□ 0.13
RPS28-204ENST00000602140 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
RPS28-204ENST00000602140 HOXC10Q9NYD6 342 aa15.87■□□□□ 0.13
RPS28-204ENST00000602140 CYP2D7A0A087X1C5 515 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 SMIM22K7EJ46 135 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 HOXC6P09630 235 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 AKR1B1P15121 316 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 SYN1P17600 705 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 ATP2B2Q01814 1243 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 C12orf60Q5U649 245 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 CLEC10AQ8IUN9 316 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 NPLOC4Q8TAT6 608 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 GDF15Q99988 308 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 MOV10L1Q9BXT6 1211 aaKnown RBP15.86■□□□□ 0.13
RPS28-204ENST00000602140 LRRCC1Q9C099 1032 aa15.86■□□□□ 0.13
RPS28-204ENST00000602140 USP17L12C9JPN9 530 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 USP17L21D6R901 530 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 SMARCA5O60264 1052 aaPredicted RBP15.85■□□□□ 0.13
RPS28-204ENST00000602140 COL6A1P12109 1028 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 CDK8P49336 464 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 ICA1Q05084 483 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 UBE3CQ15386 1083 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 SIAH1Q8IUQ4 282 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 AMOTL1Q8IY63 956 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 SPICE1Q8N0Z3 855 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 SPATC1LQ9H0A9 340 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 ARHGEF10LQ9HCE6 1279 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 TMX2Q9Y320 296 aa15.85■□□□□ 0.13
RPS28-204ENST00000602140 LAMA3Q16787 3333 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 SOX1O00570 391 aaPredicted RBP15.84■□□□□ 0.13
RPS28-204ENST00000602140 CNGA1P29973 690 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 CYP2C19P33261 490 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 BMP8BP34820 402 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 DPP9Q86TI2 863 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 LPAR1Q92633 364 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 DDRGK1Q96HY6 314 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 CCDC17Q96LX7 622 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 PUS7LQ9H0K6 701 aaKnown RBP15.84■□□□□ 0.13
RPS28-204ENST00000602140 SH2D4AQ9H788 454 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 VCPKMTQ9H867 229 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 SLC4A4Q9Y6R1 1079 aa15.84■□□□□ 0.13
RPS28-204ENST00000602140 STRNO43815 780 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 FLOT1O75955 427 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 ERCC3P19447 782 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 ADORA2AP29274 412 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 DSG3P32926 999 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 MAGEA10P43363 369 aaPredicted RBP15.83■□□□□ 0.12
RPS28-204ENST00000602140 PLS1Q14651 629 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 LRRC26Q2I0M4 334 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 ZSCAN25Q6NSZ9 544 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.12
RPS28-204ENST00000602140 C16orf86Q6ZW13 317 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 MB21D1Q8N884 522 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 SHCBP1Q8NEM2 672 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 ATG4CQ96DT6 458 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 LRCH3Q96II8 777 aa15.83■□□□□ 0.12
RPS28-204ENST00000602140 DDX20Q9UHI6 824 aaKnown RBP15.83■□□□□ 0.12
RPS28-204ENST00000602140 BAZ2AQ9UIF9 1905 aaKnown RBP15.83■□□□□ 0.12
RPS28-204ENST00000602140 MSCO60682 206 aa15.82■□□□□ 0.12
RPS28-204ENST00000602140 CTR9Q6PD62 1173 aa15.82■□□□□ 0.12
RPS28-204ENST00000602140 TRPV1Q8NER1 839 aa15.82■□□□□ 0.12
RPS28-204ENST00000602140 ECHDC1Q9NTX5 307 aa15.82■□□□□ 0.12
RPS28-204ENST00000602140 MYH8P13535 1937 aa15.82■□□□□ 0.12
RPS28-204ENST00000602140 RLFQ13129 1914 aa15.82■□□□□ 0.12
RPS28-204ENST00000602140 A0A0G2JMZ2 1700 aa15.81■□□□□ 0.12
RPS28-204ENST00000602140 WDR46O15213 610 aaKnown RBP15.81■□□□□ 0.12
RPS28-204ENST00000602140 COBLO75128 1261 aa15.81■□□□□ 0.12
RPS28-204ENST00000602140 IGHA2P01877 340 aa15.81■□□□□ 0.12
RPS28-204ENST00000602140 EEF2P13639 858 aaKnown RBP15.81■□□□□ 0.12
RPS28-204ENST00000602140 NCAPG2Q86XI2 1143 aa15.81■□□□□ 0.12
RPS28-204ENST00000602140 SENP6Q9GZR1 1112 aaPredicted RBP15.81■□□□□ 0.12
RPS28-204ENST00000602140 MROH8Q9H579 483 aa15.81■□□□□ 0.12
RPS28-204ENST00000602140 FRMPD3Q5JV73 1810 aa15.8■□□□□ 0.12
RPS28-204ENST00000602140 DNAH12Q6ZR08 3092 aa15.8■□□□□ 0.12
RPS28-204ENST00000602140 CYBAP13498 195 aa15.8■□□□□ 0.12
RPS28-204ENST00000602140 OLFML2BQ68BL8 750 aa15.8■□□□□ 0.12
RPS28-204ENST00000602140 STRBPQ96SI9 672 aaKnown RBP15.8■□□□□ 0.12
RPS28-204ENST00000602140 KANSL2Q9H9L4 492 aa15.8■□□□□ 0.12
RPS28-204ENST00000602140 MYH7P12883 1935 aa15.8■□□□□ 0.12
RPS28-204ENST00000602140 ZNF236Q9UL36 1845 aa15.8■□□□□ 0.12
RPS28-204ENST00000602140 RAD21O60216 631 aa15.79■□□□□ 0.12
RPS28-204ENST00000602140 TMEM132BQ14DG7 1078 aa15.79■□□□□ 0.12
RPS28-204ENST00000602140 TDHQ8IZJ6 230 aa15.79■□□□□ 0.12
RPS28-204ENST00000602140 KBTBD3Q8NAB2 608 aa15.79■□□□□ 0.12
RPS28-204ENST00000602140 UBE2OQ9C0C9 1292 aaKnown RBP15.79■□□□□ 0.12
RPS28-204ENST00000602140 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
RPS28-204ENST00000602140 SLC5A4Q9NY91 659 aa15.79■□□□□ 0.12
RPS28-204ENST00000602140 ARPP21Q9UBL0 812 aaPredicted RBP15.79■□□□□ 0.12
RPS28-204ENST00000602140 DNM1LO00429 736 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 FCER1AP12319 257 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 ANO1Q5XXA6 986 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 TSHZ3Q63HK5 1081 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 ABRAQ8N0Z2 381 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 STK11IPQ8N1F8 1099 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 GPATCH3Q96I76 525 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms