RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 TTC22Q5TAA0 569 aa20.87■□□□□ 0.93
IRF3-230ENST00000601809 STK11IPQ8N1F8 1099 aa20.87■□□□□ 0.93
IRF3-230ENST00000601809 RPAP3Q9H6T3 665 aaPredicted RBP20.87■□□□□ 0.93
IRF3-230ENST00000601809 VCPKMTQ9H867 229 aa20.87■□□□□ 0.93
IRF3-230ENST00000601809 MYH4Q9Y623 1939 aa20.86■□□□□ 0.93
IRF3-230ENST00000601809 CCDC171Q6TFL3 1326 aa20.86■□□□□ 0.93
IRF3-230ENST00000601809 SPDYE16A6NNV3 312 aaPredicted RBP20.86■□□□□ 0.93
IRF3-230ENST00000601809 PRDM1O75626 825 aa20.86■□□□□ 0.93
IRF3-230ENST00000601809 SOX10P56693 466 aa20.86■□□□□ 0.93
IRF3-230ENST00000601809 GTF3C2Q8WUA4 911 aaPredicted RBP20.86■□□□□ 0.93
IRF3-230ENST00000601809 ARHGEF10LQ9HCE6 1279 aa20.86■□□□□ 0.93
IRF3-230ENST00000601809 LAMA4Q16363 1823 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 FGAP02671 866 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 HOXD10P28358 340 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 ERVK-9P63128 1117 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 ERVK-24P63145 666 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 LPAR1Q92633 364 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 MKNK2Q9HBH9 465 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 NYAP2Q9P242 653 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 GJD2Q9UKL4 321 aa20.85■□□□□ 0.93
IRF3-230ENST00000601809 IRF5Q13568 498 aa20.84■□□□□ 0.93
IRF3-230ENST00000601809 NEDD1Q8NHV4 660 aa20.84■□□□□ 0.93
IRF3-230ENST00000601809 SH3TC2Q8TF17 1288 aa20.84■□□□□ 0.93
IRF3-230ENST00000601809 IL25Q9H293 177 aa20.84■□□□□ 0.93
IRF3-230ENST00000601809 INCENPQ9NQS7 918 aa20.84■□□□□ 0.93
IRF3-230ENST00000601809 BTBD7Q9P203 1132 aa20.84■□□□□ 0.93
IRF3-230ENST00000601809 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
IRF3-230ENST00000601809 MKI67P46013 3256 aaKnown RBP20.84■□□□□ 0.93
IRF3-230ENST00000601809 TNPO2O14787 897 aaKnown RBP20.83■□□□□ 0.93
IRF3-230ENST00000601809 FLT3LGP49771 235 aa20.83■□□□□ 0.93
IRF3-230ENST00000601809 CTDSPL2Q05D32 466 aa20.83■□□□□ 0.93
IRF3-230ENST00000601809 SLC9C1Q4G0N8 1177 aa20.83■□□□□ 0.93
IRF3-230ENST00000601809 GPRC5AQ8NFJ5 357 aa20.83■□□□□ 0.93
IRF3-230ENST00000601809 MKL1Q969V6 931 aa20.83■□□□□ 0.93
IRF3-230ENST00000601809 NBPF3Q9H094 633 aa20.83■□□□□ 0.93
IRF3-230ENST00000601809 PORCNQ9H237 461 aa20.83■□□□□ 0.93
IRF3-230ENST00000601809 SH2D4AQ9H788 454 aa20.83■□□□□ 0.93
IRF3-230ENST00000601809 WDR46O15213 610 aaKnown RBP20.82■□□□□ 0.92
IRF3-230ENST00000601809 NOVP48745 357 aa20.82■□□□□ 0.92
IRF3-230ENST00000601809 CEP95Q96GE4 821 aa20.82■□□□□ 0.92
IRF3-230ENST00000601809 ZNF287Q9HBT7 754 aa20.82■□□□□ 0.92
IRF3-230ENST00000601809 MTMR4Q9NYA4 1195 aa20.82■□□□□ 0.92
IRF3-230ENST00000601809 KIAA0100Q14667 2235 aaKnown RBP20.81■□□□□ 0.92
IRF3-230ENST00000601809 COL11A1P12107 1806 aaPredicted RBP20.81■□□□□ 0.92
IRF3-230ENST00000601809 POTEFA5A3E0 1075 aa20.81■□□□□ 0.92
IRF3-230ENST00000601809 ORC4O43929 436 aa20.81■□□□□ 0.92
IRF3-230ENST00000601809 GRK4P32298 578 aa20.81■□□□□ 0.92
IRF3-230ENST00000601809 PDE4BQ07343 736 aa20.81■□□□□ 0.92
IRF3-230ENST00000601809 COG2Q14746 738 aa20.81■□□□□ 0.92
IRF3-230ENST00000601809 ZNF444Q8N0Y2 327 aaPredicted RBP20.81■□□□□ 0.92
IRF3-230ENST00000601809 SPICE1Q8N0Z3 855 aa20.81■□□□□ 0.92
IRF3-230ENST00000601809 USP6NLQ92738 828 aa20.81■□□□□ 0.92
IRF3-230ENST00000601809 ADAMTS5Q9UNA0 930 aa20.81■□□□□ 0.92
IRF3-230ENST00000601809 HIP1O00291 1037 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 DSG3P32926 999 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 FAM47AQ5JRC9 791 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 CWC27Q6UX04 472 aaKnown RBP20.8■□□□□ 0.92
IRF3-230ENST00000601809 NKX2-3Q8TAU0 364 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 RAET1EQ8TD07 263 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 PXYLP1Q8TE99 480 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 COA7Q96BR5 231 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 PAGR1Q9BTK6 254 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 IL17RBQ9NRM6 502 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 SYNPO2Q9UMS6 1093 aa20.8■□□□□ 0.92
IRF3-230ENST00000601809 SLC3A2P08195 630 aaKnown RBP20.79■□□□□ 0.92
IRF3-230ENST00000601809 TFAP4Q01664 338 aa20.79■□□□□ 0.92
IRF3-230ENST00000601809 NBPF11Q86T75 865 aa20.79■□□□□ 0.92
IRF3-230ENST00000601809 SLAIN1Q8ND83 568 aa20.79■□□□□ 0.92
IRF3-230ENST00000601809 DIAPH3Q9NSV4 1193 aa20.79■□□□□ 0.92
IRF3-230ENST00000601809 ZNF236Q9UL36 1845 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 F5H6K3 240 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 ADCY3O60266 1144 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 MAPK4P31152 587 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 MFAP1P55081 439 aaKnown RBP20.78■□□□□ 0.92
IRF3-230ENST00000601809 ATP2B2Q01814 1243 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 KLRC3Q07444 240 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 MTFR1Q15390 333 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 MORN1Q5T089 497 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 ATG4CQ96DT6 458 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 TANGO6Q9C0B7 1094 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 GOPCQ9HD26 462 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 FBXO28Q9NVF7 368 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 HOXC10Q9NYD6 342 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 CLIP2Q9UDT6 1046 aa20.78■□□□□ 0.92
IRF3-230ENST00000601809 TTLL1O95922 423 aa20.77■□□□□ 0.92
IRF3-230ENST00000601809 NDUFB10O96000 172 aa20.77■□□□□ 0.92
IRF3-230ENST00000601809 TSPY3P0CV98 308 aa20.77■□□□□ 0.92
IRF3-230ENST00000601809 TSPY8P0CW00 308 aa20.77■□□□□ 0.92
IRF3-230ENST00000601809 GPR142Q7Z601 462 aa20.77■□□□□ 0.92
IRF3-230ENST00000601809 TBC1D10CQ8IV04 446 aa20.77■□□□□ 0.92
IRF3-230ENST00000601809 REPS2Q8NFH8 660 aa20.77■□□□□ 0.92
IRF3-230ENST00000601809 DSCC1Q9BVC3 393 aa20.77■□□□□ 0.92
IRF3-230ENST00000601809 FLOT1O75955 427 aa20.76■□□□□ 0.91
IRF3-230ENST00000601809 ELNP15502 786 aa20.76■□□□□ 0.91
IRF3-230ENST00000601809 CHMLP26374 656 aa20.76■□□□□ 0.91
IRF3-230ENST00000601809 FAM83BQ5T0W9 1011 aa20.76■□□□□ 0.91
IRF3-230ENST00000601809 CENPQQ7L2Z9 268 aaPredicted RBP20.76■□□□□ 0.91
IRF3-230ENST00000601809 GMCL1P1Q8NEA9 526 aa20.76■□□□□ 0.91
IRF3-230ENST00000601809 STAG1Q8WVM7 1258 aa20.76■□□□□ 0.91
IRF3-230ENST00000601809 NMT2O60551 498 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms