RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TMTC3Q6ZXV5 915 aa26.25■■□□□ 1.79
IRF3-228ENST00000601291 WDR33Q9C0J8 1336 aaKnown RBP26.25■■□□□ 1.79
IRF3-228ENST00000601291 PPFIA3O75145 1194 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 FMNL1O95466 1100 aaPredicted RBP26.24■■□□□ 1.79
IRF3-228ENST00000601291 PRAMEF18Q5VWM3 479 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 PHKBQ93100 1093 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 SLC26A6Q9BXS9 759 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 ARHGEF10LQ9HCE6 1279 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 SYNPO2Q9UMS6 1093 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 ADM5C9JUS6 153 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 CTNND1O60716 968 aaKnown RBP26.24■■□□□ 1.79
IRF3-228ENST00000601291 PARP1P09874 1014 aaKnown RBP26.24■■□□□ 1.79
IRF3-228ENST00000601291 FDPSP14324 419 aaKnown RBP26.24■■□□□ 1.79
IRF3-228ENST00000601291 PKP1Q13835 747 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 WASF1Q92558 559 aa26.24■■□□□ 1.79
IRF3-228ENST00000601291 PLEKHA8P1O95397 391 aa26.23■■□□□ 1.79
IRF3-228ENST00000601291 BRD1O95696 1058 aa26.23■■□□□ 1.79
IRF3-228ENST00000601291 AKAP17AQ02040 695 aaKnown RBP26.23■■□□□ 1.79
IRF3-228ENST00000601291 LZTS2Q9BRK4 669 aa26.23■■□□□ 1.79
IRF3-228ENST00000601291 RNF26Q9BY78 433 aaPredicted RBP26.23■■□□□ 1.79
IRF3-228ENST00000601291 MAD2L2Q9UI95 211 aa26.23■■□□□ 1.79
IRF3-228ENST00000601291 PDHBP11177 359 aa26.22■■□□□ 1.79
IRF3-228ENST00000601291 USP48Q86UV5 1035 aa26.22■■□□□ 1.79
IRF3-228ENST00000601291 CMTR1Q8N1G2 835 aaKnown RBP26.22■■□□□ 1.79
IRF3-228ENST00000601291 CCDC82Q8N4S0 544 aa26.22■■□□□ 1.79
IRF3-228ENST00000601291 MYH4Q9Y623 1939 aa26.21■■□□□ 1.79
IRF3-228ENST00000601291 SSC5DA1L4H1 1573 aa26.21■■□□□ 1.79
IRF3-228ENST00000601291 VPS37CA5D8V6 355 aaPredicted RBP26.21■■□□□ 1.79
IRF3-228ENST00000601291 PALM3A6NDB9 673 aaPredicted RBP26.21■■□□□ 1.79
IRF3-228ENST00000601291 H3BQV1 296 aa26.21■■□□□ 1.79
IRF3-228ENST00000601291 VEGFAP15692 232 aaPredicted RBP26.21■■□□□ 1.79
IRF3-228ENST00000601291 ASPRV1Q53RT3 343 aa26.21■■□□□ 1.79
IRF3-228ENST00000601291 IFFO2Q5TF58 517 aa26.21■■□□□ 1.79
IRF3-228ENST00000601291 NBPF11Q86T75 865 aa26.21■■□□□ 1.79
IRF3-228ENST00000601291 SH2D4AQ9H788 454 aa26.21■■□□□ 1.79
IRF3-228ENST00000601291 ZNF112Q9UJU3 913 aa26.21■■□□□ 1.79
IRF3-228ENST00000601291 DEXIO95424 95 aa26.2■■□□□ 1.79
IRF3-228ENST00000601291 SNHG28P0DPA3 235 aa26.2■■□□□ 1.79
IRF3-228ENST00000601291 SIAH1Q8IUQ4 282 aa26.2■■□□□ 1.79
IRF3-228ENST00000601291 WRNIP1Q96S55 665 aa26.2■■□□□ 1.79
IRF3-228ENST00000601291 CNTNAP5Q8WYK1 1306 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 USP17L5A8MUK1 530 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 ZSCAN22P10073 491 aaPredicted RBP26.2■■□□□ 1.78
IRF3-228ENST00000601291 NF2P35240 595 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 FUT2Q10981 343 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 USP17L2Q6R6M4 530 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 CDC37L1Q7L3B6 337 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 STAG2Q8N3U4 1231 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 SRBD1Q8N5C6 995 aaKnown RBP26.2■■□□□ 1.78
IRF3-228ENST00000601291 GMCL1P1Q8NEA9 526 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 ALG1Q9BT22 464 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 RBM27Q9P2N5 1060 aaKnown RBP26.2■■□□□ 1.78
IRF3-228ENST00000601291 CLEC11AQ9Y240 323 aa26.2■■□□□ 1.78
IRF3-228ENST00000601291 PRPF3O43395 683 aaKnown RBP26.19■■□□□ 1.78
IRF3-228ENST00000601291 DCAF4Q8WV16 495 aa26.19■■□□□ 1.78
IRF3-228ENST00000601291 C8orf76Q96K31 380 aa26.19■■□□□ 1.78
IRF3-228ENST00000601291 MTMR6Q9Y217 621 aa26.19■■□□□ 1.78
IRF3-228ENST00000601291 ZDHHC9Q9Y397 364 aa26.19■■□□□ 1.78
IRF3-228ENST00000601291 ATAD5Q96QE3 1844 aa26.19■■□□□ 1.78
IRF3-228ENST00000601291 KLRF2D3W0D1 207 aa26.18■■□□□ 1.78
IRF3-228ENST00000601291 RAD21O60216 631 aa26.18■■□□□ 1.78
IRF3-228ENST00000601291 GOLGA8HP0CJ92 632 aa26.18■■□□□ 1.78
IRF3-228ENST00000601291 GPATCH4Q5T3I0 446 aaKnown RBP26.18■■□□□ 1.78
IRF3-228ENST00000601291 SCYL3Q8IZE3 742 aa26.18■■□□□ 1.78
IRF3-228ENST00000601291 RGS22Q8NE09 1264 aa26.18■■□□□ 1.78
IRF3-228ENST00000601291 RRAGCQ9HB90 399 aa26.18■■□□□ 1.78
IRF3-228ENST00000601291 PPP1R12BO60237 982 aaPredicted RBP26.17■■□□□ 1.78
IRF3-228ENST00000601291 SMARCA1P28370 1054 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 INPP5BP32019 993 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 CCDC96Q2M329 555 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 SLFN13Q68D06 897 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 RASGRP2Q7LDG7 609 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 TNPO1Q92973 898 aaKnown RBP26.17■■□□□ 1.78
IRF3-228ENST00000601291 KLRG1Q96E93 195 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 CDCA5Q96FF9 252 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 GOPCQ9HD26 462 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 TMX2Q9Y320 296 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 DOCK1Q14185 1865 aa26.17■■□□□ 1.78
IRF3-228ENST00000601291 POLR2AP24928 1970 aaKnown RBP26.17■■□□□ 1.78
IRF3-228ENST00000601291 F5H6K3 240 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 SLC1A4P43007 532 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 KLRC3Q07444 240 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 ZNF543Q08ER8 600 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 TRIM29Q14134 588 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 FOXD4L5Q5VV16 416 aaPredicted RBP26.16■■□□□ 1.78
IRF3-228ENST00000601291 FOXD4L4Q8WXT5 416 aaPredicted RBP26.16■■□□□ 1.78
IRF3-228ENST00000601291 SPZ1Q9BXG8 430 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 PICK1Q9NRD5 415 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 FRMPD2Q68DX3 1309 aaPredicted RBP26.16■■□□□ 1.78
IRF3-228ENST00000601291 A0A1W2PRG0 241 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 FOSBP53539 338 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 GMCL1Q96IK5 515 aa26.16■■□□□ 1.78
IRF3-228ENST00000601291 GLIS2Q9BZE0 524 aaPredicted RBP26.16■■□□□ 1.78
IRF3-228ENST00000601291 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.16■■□□□ 1.78
IRF3-228ENST00000601291 V9GY48 417 aaPredicted RBP26.16■■□□□ 1.78
IRF3-228ENST00000601291 ECE1P42892 770 aa26.15■■□□□ 1.78
IRF3-228ENST00000601291 ISY1Q9ULR0 285 aaKnown RBP26.15■■□□□ 1.78
IRF3-228ENST00000601291 NDUFB10O96000 172 aa26.14■■□□□ 1.78
IRF3-228ENST00000601291 F13A1P00488 732 aa26.14■■□□□ 1.78
IRF3-228ENST00000601291 XBP1P17861 261 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms