RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 SMARCA5O60264 1052 aaPredicted RBP20.46■□□□□ 0.87
SCAF1-204ENST00000601038 CHGBP05060 677 aa20.46■□□□□ 0.87
SCAF1-204ENST00000601038 SIAH1Q8IUQ4 282 aa20.46■□□□□ 0.87
SCAF1-204ENST00000601038 LPAR1Q92633 364 aa20.46■□□□□ 0.87
SCAF1-204ENST00000601038 C11orf49Q9H6J7 331 aa20.46■□□□□ 0.87
SCAF1-204ENST00000601038 ECHDC1Q9NTX5 307 aa20.46■□□□□ 0.87
SCAF1-204ENST00000601038 HOXC6P09630 235 aa20.45■□□□□ 0.86
SCAF1-204ENST00000601038 AKR1B1P15121 316 aa20.45■□□□□ 0.86
SCAF1-204ENST00000601038 CCND3P30281 292 aaPredicted RBP20.45■□□□□ 0.86
SCAF1-204ENST00000601038 CDK8P49336 464 aa20.45■□□□□ 0.86
SCAF1-204ENST00000601038 GRB14Q14449 540 aa20.45■□□□□ 0.86
SCAF1-204ENST00000601038 TANGO6Q9C0B7 1094 aa20.45■□□□□ 0.86
SCAF1-204ENST00000601038 ARHGEF10LQ9HCE6 1279 aa20.45■□□□□ 0.86
SCAF1-204ENST00000601038 TMX2Q9Y320 296 aa20.45■□□□□ 0.86
SCAF1-204ENST00000601038 SLC4A4Q9Y6R1 1079 aa20.45■□□□□ 0.86
SCAF1-204ENST00000601038 BAZ2AQ9UIF9 1905 aaKnown RBP20.45■□□□□ 0.86
SCAF1-204ENST00000601038 CYP2D7A0A087X1C5 515 aa20.44■□□□□ 0.86
SCAF1-204ENST00000601038 ICA1Q05084 483 aa20.44■□□□□ 0.86
SCAF1-204ENST00000601038 KIAA1755Q5JYT7 1200 aa20.44■□□□□ 0.86
SCAF1-204ENST00000601038 MFSD14CQ5VZR4 134 aa20.44■□□□□ 0.86
SCAF1-204ENST00000601038 LHX8Q68G74 356 aa20.44■□□□□ 0.86
SCAF1-204ENST00000601038 C16orf86Q6ZW13 317 aa20.44■□□□□ 0.86
SCAF1-204ENST00000601038 PUS7LQ9H0K6 701 aaKnown RBP20.44■□□□□ 0.86
SCAF1-204ENST00000601038 DCTPP1Q9H773 170 aa20.44■□□□□ 0.86
SCAF1-204ENST00000601038 SH2D4AQ9H788 454 aa20.44■□□□□ 0.86
SCAF1-204ENST00000601038 ALPK3Q96L96 1907 aa20.43■□□□□ 0.86
SCAF1-204ENST00000601038 A0A1W2PPC1 479 aa20.43■□□□□ 0.86
SCAF1-204ENST00000601038 SMIM22K7EJ46 135 aa20.43■□□□□ 0.86
SCAF1-204ENST00000601038 STRNO43815 780 aa20.43■□□□□ 0.86
SCAF1-204ENST00000601038 CTR9Q6PD62 1173 aa20.43■□□□□ 0.86
SCAF1-204ENST00000601038 MB21D1Q8N884 522 aa20.43■□□□□ 0.86
SCAF1-204ENST00000601038 MOV10L1Q9BXT6 1211 aaKnown RBP20.43■□□□□ 0.86
SCAF1-204ENST00000601038 FLRT1Q9NZU1 646 aa20.43■□□□□ 0.86
SCAF1-204ENST00000601038 MYH7P12883 1935 aa20.43■□□□□ 0.86
SCAF1-204ENST00000601038 DSG3P32926 999 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 ATP2B2Q01814 1243 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 CLEC10AQ8IUN9 316 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 C7orf61Q8IZ16 206 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 SHCBP1Q8NEM2 672 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 NPLOC4Q8TAT6 608 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 SPATC1LQ9H0A9 340 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 VCPKMTQ9H867 229 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 STAP2Q9UGK3 403 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 MYH8P13535 1937 aa20.42■□□□□ 0.86
SCAF1-204ENST00000601038 COL6A1P12109 1028 aa20.41■□□□□ 0.86
SCAF1-204ENST00000601038 SPICE1Q8N0Z3 855 aa20.41■□□□□ 0.86
SCAF1-204ENST00000601038 KBTBD3Q8NAB2 608 aa20.41■□□□□ 0.86
SCAF1-204ENST00000601038 GPATCH3Q96I76 525 aa20.41■□□□□ 0.86
SCAF1-204ENST00000601038 STRBPQ96SI9 672 aaKnown RBP20.41■□□□□ 0.86
SCAF1-204ENST00000601038 KANSL2Q9H9L4 492 aa20.41■□□□□ 0.86
SCAF1-204ENST00000601038 PFASO15067 1338 aa20.41■□□□□ 0.86
SCAF1-204ENST00000601038 RLFQ13129 1914 aa20.41■□□□□ 0.86
SCAF1-204ENST00000601038 WDR46O15213 610 aaKnown RBP20.4■□□□□ 0.86
SCAF1-204ENST00000601038 FLOT1O75955 427 aa20.4■□□□□ 0.86
SCAF1-204ENST00000601038 IGHA2P01877 340 aa20.4■□□□□ 0.86
SCAF1-204ENST00000601038 ERCC3P19447 782 aa20.4■□□□□ 0.86
SCAF1-204ENST00000601038 DPP9Q86TI2 863 aa20.4■□□□□ 0.86
SCAF1-204ENST00000601038 ARPP21Q9UBL0 812 aaPredicted RBP20.4■□□□□ 0.86
SCAF1-204ENST00000601038 MSCO60682 206 aa20.39■□□□□ 0.85
SCAF1-204ENST00000601038 EEF2P13639 858 aaKnown RBP20.39■□□□□ 0.85
SCAF1-204ENST00000601038 ADORA2AP29274 412 aa20.39■□□□□ 0.85
SCAF1-204ENST00000601038 BMP8BP34820 402 aa20.39■□□□□ 0.85
SCAF1-204ENST00000601038 SBK1Q52WX2 424 aa20.39■□□□□ 0.85
SCAF1-204ENST00000601038 GIMAP6Q6P9H5 292 aa20.39■□□□□ 0.85
SCAF1-204ENST00000601038 GDF15Q99988 308 aa20.39■□□□□ 0.85
SCAF1-204ENST00000601038 MROH8Q9H579 483 aa20.39■□□□□ 0.85
SCAF1-204ENST00000601038 ZMYND8Q9ULU4 1186 aaPredicted RBP20.39■□□□□ 0.85
SCAF1-204ENST00000601038 CYP2C19P33261 490 aa20.38■□□□□ 0.85
SCAF1-204ENST00000601038 OLFML2BQ68BL8 750 aa20.38■□□□□ 0.85
SCAF1-204ENST00000601038 ATG4CQ96DT6 458 aa20.38■□□□□ 0.85
SCAF1-204ENST00000601038 DDX20Q9UHI6 824 aaKnown RBP20.38■□□□□ 0.85
SCAF1-204ENST00000601038 ADAMTS5Q9UNA0 930 aa20.38■□□□□ 0.85
SCAF1-204ENST00000601038 GSG1L2A8MUP6 293 aa20.37■□□□□ 0.85
SCAF1-204ENST00000601038 RNF113AO15541 343 aaKnown RBP20.37■□□□□ 0.85
SCAF1-204ENST00000601038 ZFYP08048 801 aaPredicted RBP20.37■□□□□ 0.85
SCAF1-204ENST00000601038 CNGA1P29973 690 aa20.37■□□□□ 0.85
SCAF1-204ENST00000601038 PLS1Q14651 629 aa20.37■□□□□ 0.85
SCAF1-204ENST00000601038 ABRAQ8N0Z2 381 aa20.37■□□□□ 0.85
SCAF1-204ENST00000601038 APPBP2Q92624 585 aa20.37■□□□□ 0.85
SCAF1-204ENST00000601038 OSBP2Q969R2 916 aa20.37■□□□□ 0.85
SCAF1-204ENST00000601038 GOPCQ9HD26 462 aa20.37■□□□□ 0.85
SCAF1-204ENST00000601038 SLC5A4Q9NY91 659 aa20.37■□□□□ 0.85
SCAF1-204ENST00000601038 A0A0G2JMZ2 1700 aa20.36■□□□□ 0.85
SCAF1-204ENST00000601038 COBLO75128 1261 aa20.36■□□□□ 0.85
SCAF1-204ENST00000601038 TSHZ3Q63HK5 1081 aa20.36■□□□□ 0.85
SCAF1-204ENST00000601038 NCAPG2Q86XI2 1143 aa20.36■□□□□ 0.85
SCAF1-204ENST00000601038 ZNF236Q9UL36 1845 aa20.35■□□□□ 0.85
SCAF1-204ENST00000601038 SLC25A27O95847 323 aa20.35■□□□□ 0.85
SCAF1-204ENST00000601038 CYBAP13498 195 aa20.35■□□□□ 0.85
SCAF1-204ENST00000601038 SYN1P17600 705 aa20.35■□□□□ 0.85
SCAF1-204ENST00000601038 TMEM132BQ14DG7 1078 aa20.35■□□□□ 0.85
SCAF1-204ENST00000601038 SAMD1Q6SPF0 538 aaPredicted RBP20.35■□□□□ 0.85
SCAF1-204ENST00000601038 TRPV1Q8NER1 839 aa20.35■□□□□ 0.85
SCAF1-204ENST00000601038 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.35■□□□□ 0.85
SCAF1-204ENST00000601038 GNAT2P19087 354 aa20.34■□□□□ 0.85
SCAF1-204ENST00000601038 RASA1P20936 1047 aa20.34■□□□□ 0.85
SCAF1-204ENST00000601038 LRRC26Q2I0M4 334 aa20.34■□□□□ 0.85
SCAF1-204ENST00000601038 LRRFIP1Q32MZ4 808 aaKnown RBP20.34■□□□□ 0.85
SCAF1-204ENST00000601038 MKNK2Q9HBH9 465 aa20.34■□□□□ 0.85
SCAF1-204ENST00000601038 TTC41PQ6P2S7 1318 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms