RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 KCNH4Q9UQ05 1017 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 TACC3Q9Y6A5 838 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
CHMP2A-207ENST00000600804 WDR19Q8NEZ3 1342 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 SLURP2P0DP57 97 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 CAP2P40123 477 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 PSMC4P43686 418 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 ARHGEF6Q15052 776 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 CERKLQ49MI3 558 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 GPAT2Q6NUI2 795 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 ANKRD23Q86SG2 305 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 MB21D2Q8IYB1 491 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 ZNF444Q8N0Y2 327 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 SLC44A5Q8NCS7 719 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 PRO3102Q9H379 93 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 TCP11L1Q9NUJ3 509 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 TAF6LQ9Y6J9 622 aa13.74□□□□□ -0.21
CHMP2A-207ENST00000600804 NEDD4P46934 1319 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 PDHXO00330 501 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 GNRH1P01148 92 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 BCRP11274 1271 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 NOVP48745 357 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 CCDC178Q5BJE1 867 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 FBXL16Q8N461 479 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 NEDD1Q8NHV4 660 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 CUL9Q8IWT3 2517 aa13.73□□□□□ -0.21
CHMP2A-207ENST00000600804 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 IGKV6D-41A0A0C4DH26 115 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 ASNSP08243 561 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 PRMT2P55345 433 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 RRP1BQ14684 758 aaKnown RBP13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 KIF22Q14807 665 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 TMEM179Q6ZVK1 233 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 RALYLQ86SE5 291 aaKnown RBP13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 TBC1D2Q9BYX2 928 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 ZSWIM6Q9HCJ5 1215 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 SYNPO2Q9UMS6 1093 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 GABRQQ9UN88 632 aa13.72□□□□□ -0.21
CHMP2A-207ENST00000600804 FRMPD3Q5JV73 1810 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 UNC80Q8N2C7 3258 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 FAM196BA6NMK8 535 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 B4E1Z4 1266 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 PRDM1O75626 825 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 CYP2C8P10632 490 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 CCL5P13501 91 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 GRK4P32298 578 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 MCM5P33992 734 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 GJA8P48165 433 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 PRKCZQ05513 592 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 ADCK5Q3MIX3 580 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 DHX32Q7L7V1 743 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 IQCA1Q86XH1 822 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 SCYL3Q8IZE3 742 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 ANKS1AQ92625 1134 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 KIF2CQ99661 725 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 INCENPQ9NQS7 918 aa13.71□□□□□ -0.21
CHMP2A-207ENST00000600804 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 KDM4AO75164 1064 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 AKR1B1P15121 316 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 TFAP4Q01664 338 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 EXOSC10Q01780 885 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 BLOC1S2Q6QNY1 142 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 TMEM87BQ96K49 555 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 TTC14Q96N46 770 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 AGXT2Q9BYV1 514 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 ALDH8A1Q9H2A2 487 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 KANSL2Q9H9L4 492 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 ZBTB21Q9ULJ3 1066 aa13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 LAMA2P24043 3122 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-207ENST00000600804 DNAH12Q6ZR08 3092 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 GJB1P08034 283 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 RPS6KB1P23443 525 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 GUCY1A2P33402 732 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 ANTXR2P58335 489 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 RABEP1Q15276 862 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 RRP12Q5JTH9 1297 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 RUFY3Q7L099 469 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 STK11IPQ8N1F8 1099 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 NKX2-3Q8TAU0 364 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 MKL1Q969V6 931 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 IL17RBQ9NRM6 502 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 TOMM22Q9NS69 142 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 MTMR4Q9NYA4 1195 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 CYP46A1Q9Y6A2 500 aa13.69□□□□□ -0.22
CHMP2A-207ENST00000600804 MYH4Q9Y623 1939 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms