RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ARPP21Q9UBL0 812 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 PHLPP1O60346 1717 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 TM4SF1P30408 202 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 TERF1P54274 439 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 ST5P78524 1137 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 CCZ1BP86790 482 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 CCZ1P86791 482 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 SYT10Q6XYQ8 523 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 GGA1Q9UJY5 639 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 KIF5BP33176 963 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 INF2Q27J81 1249 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 USP17L2Q6R6M4 530 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 SRPRBQ9Y5M8 271 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 UTRNP46939 3433 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 MPHOSPH10O00566 681 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 CALM1P0DP23 149 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 CALM2P0DP24 149 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 CALM3P0DP25 149 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 CCT6AP40227 531 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 GSDMDP57764 484 aa13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF1-220ENST00000600274 MYH2Q9UKX2 1941 aa13.12□□□□□ -0.31
ARHGEF1-220ENST00000600274 CDC25BP30305 580 aa13.12□□□□□ -0.31
ARHGEF1-220ENST00000600274 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
ARHGEF1-220ENST00000600274 XDHP47989 1333 aa13.12□□□□□ -0.31
ARHGEF1-220ENST00000600274 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF1-220ENST00000600274 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
ARHGEF1-220ENST00000600274 PHF20Q9BVI0 1012 aa13.12□□□□□ -0.31
ARHGEF1-220ENST00000600274 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
ARHGEF1-220ENST00000600274 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 TUBE1Q9UJT0 475 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 SEMA3EO15041 775 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.318e-8■■■□□ 15.6
ARHGEF1-220ENST00000600274 RRAGBQ5VZM2 374 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 BCL9LQ86UU0 1499 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 NAPAP54920 295 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 LETM2Q2VYF4 491 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 EYA3Q99504 573 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 DNAI1Q9UI46 699 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 ANKRD36CQ5JPF3 1778 aa13.11□□□□□ -0.31
ARHGEF1-220ENST00000600274 DDAH1O94760 285 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 C12orf60Q5U649 245 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 GPIHBP1Q8IV16 184 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 SMAP1Q8IYB5 467 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.313e-6■□□□□ 10.7
ARHGEF1-220ENST00000600274 PLCH1Q4KWH8 1693 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 NEMFO60524 1076 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 FUT2Q10981 343 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 JAKMIP3Q5VZ66 844 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 QTRT2Q9H974 415 aaKnown RBP13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 LDHCP07864 332 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 ERCC3P19447 782 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 CACNB3P54284 484 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 CCDC150Q8NCX0 1101 aa13.1□□□□□ -0.31
ARHGEF1-220ENST00000600274 ACTN4O43707 911 aaKnown RBP13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 KIF18AQ8NI77 898 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 PAGE5Q96GU1 130 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 TMEM47Q9BQJ4 181 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 FAM196BA6NMK8 535 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 GYS1P13807 737 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 HSPA1LP34931 641 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 STAT6P42226 847 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 GSTO1P78417 241 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 TCP10Q12799 353 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 VPS16Q9H269 839 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 LEMD3Q9Y2U8 911 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 CICQ96RK0 1608 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 IKBKBO14920 756 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 E4F1Q66K89 784 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 ZSCAN29Q8IWY8 852 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 HSD3B7Q9H2F3 369 aa13.09□□□□□ -0.31
ARHGEF1-220ENST00000600274 POLLQ9UGP5 575 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms