RNA–Protein interactions for RNA: ENST00000600227.5

FKRP-218, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-218ENST00000600227 USP17L22D6RA61 530 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 USP17L17D6RBQ6 530 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 USP17L19D6RCP7 530 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 USP17L20D6RJB6 530 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 RANBP6O60518 1105 aaKnown RBP22.72■■□□□ 1.23
FKRP-218ENST00000600227 IRX3P78415 501 aaPredicted RBP22.72■■□□□ 1.23
FKRP-218ENST00000600227 ATP2B2Q01814 1243 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 USP17L24Q0WX57 530 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 MAP4K1Q92918 833 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 MKL1Q969V6 931 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 NEDD4P46934 1319 aa22.72■■□□□ 1.23
FKRP-218ENST00000600227 GCLCP48506 637 aaPredicted RBP22.71■■□□□ 1.23
FKRP-218ENST00000600227 NOVP48745 357 aa22.71■■□□□ 1.23
FKRP-218ENST00000600227 PPP4R3BQ5MIZ7 849 aa22.71■■□□□ 1.23
FKRP-218ENST00000600227 CATSPERGQ6ZRH7 1159 aa22.71■■□□□ 1.23
FKRP-218ENST00000600227 LSG1Q9H089 658 aaKnown RBP22.71■■□□□ 1.23
FKRP-218ENST00000600227 RPAP3Q9H6T3 665 aaPredicted RBP22.71■■□□□ 1.23
FKRP-218ENST00000600227 GOPCQ9HD26 462 aa22.71■■□□□ 1.23
FKRP-218ENST00000600227 IL17RBQ9NRM6 502 aa22.71■■□□□ 1.23
FKRP-218ENST00000600227 TTLL1O95922 423 aa22.7■■□□□ 1.22
FKRP-218ENST00000600227 HERVK_113P62684 666 aa22.7■■□□□ 1.22
FKRP-218ENST00000600227 CASC1Q6TDU7 716 aa22.7■■□□□ 1.22
FKRP-218ENST00000600227 CTU1Q7Z7A3 348 aaKnown RBP22.7■■□□□ 1.22
FKRP-218ENST00000600227 CD99L2Q8TCZ2 262 aa22.7■■□□□ 1.22
FKRP-218ENST00000600227 P2RX7Q99572 595 aaKnown RBP22.7■■□□□ 1.22
FKRP-218ENST00000600227 TOMM22Q9NS69 142 aa22.7■■□□□ 1.22
FKRP-218ENST00000600227 TCP11L1Q9NUJ3 509 aa22.7■■□□□ 1.22
FKRP-218ENST00000600227 WDR46O15213 610 aaKnown RBP22.69■■□□□ 1.22
FKRP-218ENST00000600227 CYP21A2P08686 494 aa22.69■■□□□ 1.22
FKRP-218ENST00000600227 LACTBP83111 547 aaPredicted RBP22.69■■□□□ 1.22
FKRP-218ENST00000600227 CAP1Q01518 475 aa22.69■■□□□ 1.22
FKRP-218ENST00000600227 FAM110CQ1W6H9 321 aa22.69■■□□□ 1.22
FKRP-218ENST00000600227 RRP12Q5JTH9 1297 aaKnown RBP22.69■■□□□ 1.22
FKRP-218ENST00000600227 KIAA1211Q6ZU35 1233 aa22.69■■□□□ 1.22
FKRP-218ENST00000600227 NKX2-3Q8TAU0 364 aa22.69■■□□□ 1.22
FKRP-218ENST00000600227 CLIP2Q9UDT6 1046 aa22.69■■□□□ 1.22
FKRP-218ENST00000600227 LBX2Q6XYB7 198 aa22.68■■□□□ 1.22
FKRP-218ENST00000600227 SPICE1Q8N0Z3 855 aa22.68■■□□□ 1.22
FKRP-218ENST00000600227 GTF3C2Q8WUA4 911 aaPredicted RBP22.68■■□□□ 1.22
FKRP-218ENST00000600227 ESR2Q92731 530 aa22.68■■□□□ 1.22
FKRP-218ENST00000600227 MORF4L1Q9UBU8 362 aa22.68■■□□□ 1.22
FKRP-218ENST00000600227 RBM8AQ9Y5S9 174 aaKnown RBP22.68■■□□□ 1.22
FKRP-218ENST00000600227 F5H6K3 240 aa22.67■■□□□ 1.22
FKRP-218ENST00000600227 NMT2O60551 498 aa22.67■■□□□ 1.22
FKRP-218ENST00000600227 KLRC3Q07444 240 aa22.67■■□□□ 1.22
FKRP-218ENST00000600227 POTEEQ6S8J3 1075 aa22.67■■□□□ 1.22
FKRP-218ENST00000600227 GMCL1P1Q8NEA9 526 aa22.67■■□□□ 1.22
FKRP-218ENST00000600227 MYPNQ86TC9 1320 aa22.66■■□□□ 1.22
FKRP-218ENST00000600227 NDUFB10O96000 172 aa22.66■■□□□ 1.22
FKRP-218ENST00000600227 LRRC47Q8N1G4 583 aaKnown RBP22.66■■□□□ 1.22
FKRP-218ENST00000600227 ANKRD13CQ8N6S4 541 aa22.66■■□□□ 1.22
FKRP-218ENST00000600227 TANGO6Q9C0B7 1094 aa22.66■■□□□ 1.22
FKRP-218ENST00000600227 ARHGAP39Q9C0H5 1083 aa22.66■■□□□ 1.22
FKRP-218ENST00000600227 CNNM2Q9H8M5 875 aa22.66■■□□□ 1.22
FKRP-218ENST00000600227 STX8Q9UNK0 236 aa22.66■■□□□ 1.22
FKRP-218ENST00000600227 SPDYE16A6NNV3 312 aaPredicted RBP22.65■■□□□ 1.22
FKRP-218ENST00000600227 CTGFP29279 349 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 KIF22Q14807 665 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 OTOP1Q7RTM1 612 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 TNS4Q8IZW8 715 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 KRT23Q9C075 422 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 MCOLN1Q9GZU1 580 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 ANO2Q9NQ90 1003 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 RBPJLQ9UBG7 517 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 TRIM17Q9Y577 477 aa22.65■■□□□ 1.22
FKRP-218ENST00000600227 B4E1Z4 1266 aa22.64■■□□□ 1.21
FKRP-218ENST00000600227 KDM4AO75164 1064 aa22.64■■□□□ 1.21
FKRP-218ENST00000600227 COG2Q14746 738 aa22.64■■□□□ 1.21
FKRP-218ENST00000600227 ARHGEF6Q15052 776 aa22.64■■□□□ 1.21
FKRP-218ENST00000600227 PKN2Q16513 984 aaKnown RBP22.64■■□□□ 1.21
FKRP-218ENST00000600227 EFCC1Q9HA90 598 aa22.64■■□□□ 1.21
FKRP-218ENST00000600227 TXNRD2Q9NNW7 524 aa22.64■■□□□ 1.21
FKRP-218ENST00000600227 TAF6LQ9Y6J9 622 aa22.64■■□□□ 1.21
FKRP-218ENST00000600227 HTTP42858 3142 aa22.63■■□□□ 1.21
FKRP-218ENST00000600227 GNRH1P01148 92 aa22.63■■□□□ 1.21
FKRP-218ENST00000600227 FAM83BQ5T0W9 1011 aa22.63■■□□□ 1.21
FKRP-218ENST00000600227 RCSD1Q6JBY9 416 aa22.63■■□□□ 1.21
FKRP-218ENST00000600227 TRIM47Q96LD4 638 aa22.63■■□□□ 1.21
FKRP-218ENST00000600227 TTC14Q96N46 770 aa22.63■■□□□ 1.21
FKRP-218ENST00000600227 HOXC10Q9NYD6 342 aa22.63■■□□□ 1.21
FKRP-218ENST00000600227 RABGAP1Q9Y3P9 1069 aa22.63■■□□□ 1.21
FKRP-218ENST00000600227 COL11A1P12107 1806 aaPredicted RBP22.63■■□□□ 1.21
FKRP-218ENST00000600227 CNMDO75829 334 aa22.62■■□□□ 1.21
FKRP-218ENST00000600227 FLOT1O75955 427 aa22.62■■□□□ 1.21
FKRP-218ENST00000600227 TOP1P11387 765 aaKnown RBP22.62■■□□□ 1.21
FKRP-218ENST00000600227 DSG3P32926 999 aa22.62■■□□□ 1.21
FKRP-218ENST00000600227 PSMC4P43686 418 aa22.62■■□□□ 1.21
FKRP-218ENST00000600227 NECTIN1Q15223 517 aa22.62■■□□□ 1.21
FKRP-218ENST00000600227 GMCL1Q96IK5 515 aa22.62■■□□□ 1.21
FKRP-218ENST00000600227 NUP88Q99567 741 aaPredicted RBP22.62■■□□□ 1.21
FKRP-218ENST00000600227 ZSWIM5Q9P217 1185 aa22.62■■□□□ 1.21
FKRP-218ENST00000600227 E7EWF7 191 aa22.61■■□□□ 1.21
FKRP-218ENST00000600227 RAD21O60216 631 aa22.61■■□□□ 1.21
FKRP-218ENST00000600227 FCGRTP55899 365 aa22.61■■□□□ 1.21
FKRP-218ENST00000600227 ERVK-9P63128 1117 aa22.61■■□□□ 1.21
FKRP-218ENST00000600227 ERVK-24P63145 666 aa22.61■■□□□ 1.21
FKRP-218ENST00000600227 CCDC178Q5BJE1 867 aa22.61■■□□□ 1.21
FKRP-218ENST00000600227 SLFN13Q68D06 897 aa22.61■■□□□ 1.21
FKRP-218ENST00000600227 STOX1Q6ZVD7 989 aa22.61■■□□□ 1.21
FKRP-218ENST00000600227 IQCA1Q86XH1 822 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms