RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-231ENST00000599082 SLC7A5Q01650 507 aa9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 BBS9Q3SYG4 887 aa9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 GNPTABQ3T906 1256 aa9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 LCE3BQ5TA77 95 aa9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 NBPF12Q5TAG4 269 aaPredicted RBP9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 TDRD10Q5VZ19 366 aaKnown RBP9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 RNF141Q8WVD5 230 aa9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 HEXIM2Q96MH2 286 aaKnown RBP9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 PIF1Q9H611 641 aa9.79□□□□□ -0.84
SOX2-OT-231ENST00000599082 IGLV1-40P01703 118 aa9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 CHMP4BP1P59074 171 aa9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 BMS1Q14692 1282 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 NCAPHQ15003 741 aa9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 CYP27C1Q4G0S4 372 aa9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 MRM1Q6IN84 353 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 KIAA1211LQ6NV74 962 aa9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 FBXL18Q96ME1 805 aa9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 PRDM5Q9NQX1 630 aaPredicted RBP9.78□□□□□ -0.84
SOX2-OT-231ENST00000599082 TP53P04637 393 aaPredicted RBP9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 CYP7A1P22680 504 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 RNF4P78317 190 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 CYP27A1Q02318 531 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 RASA3Q14644 834 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 SHKBP1Q8TBC3 707 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 KRTAP4-12Q9BQ66 201 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 ASPNQ9BXN1 380 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 CCDC113Q9H0I3 377 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 FAM86C1Q9NVL1 165 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 SNTG2Q9NY99 539 aa9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 CDK11AQ9UQ88 783 aaPredicted RBP9.77□□□□□ -0.85
SOX2-OT-231ENST00000599082 WDR64B1ANS9 1081 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 GSC2O15499 205 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 DYRK3O43781 588 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 NFE2L2Q16236 605 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 AXDND1Q5T1B0 1012 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 SFRP5Q5T4F7 317 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 DUSP27Q5VZP5 1158 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 COX4I2Q96KJ9 171 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 DEPDC7Q96QD5 511 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 SRPK1Q96SB4 655 aaKnown RBP9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 MKRN2Q9H000 416 aaKnown RBP9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 GTF2IRD1Q9UHL9 959 aa9.76□□□□□ -0.85
SOX2-OT-231ENST00000599082 FAM221BA6H8Z2 402 aa9.75□□□□□ -0.85
SOX2-OT-231ENST00000599082 CCDC85CA6NKD9 419 aa9.75□□□□□ -0.85
SOX2-OT-231ENST00000599082 IGF2BP3O00425 579 aaKnown RBP eCLIP9.75□□□□□ -0.85
SOX2-OT-231ENST00000599082 LRRN2O75325 713 aa9.75□□□□□ -0.85
SOX2-OT-231ENST00000599082 ZMYM1Q5SVZ6 1142 aa9.75□□□□□ -0.85
SOX2-OT-231ENST00000599082 LRP10Q7Z4F1 713 aa9.75□□□□□ -0.85
SOX2-OT-231ENST00000599082 CCDC144CPQ8IYA2 1237 aa9.75□□□□□ -0.85
SOX2-OT-231ENST00000599082 PRR33A8MZF0 331 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 CBX7O95931 251 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 DCAF15Q66K64 600 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 C22orf34Q6ZV56 151 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 Q96M66 194 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 METTL22Q9BUU2 404 aaPredicted RBP9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 OSBPL1AQ9BXW6 950 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 SEMA6BQ9H3T3 888 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 ATG3Q9NT62 314 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 U3KQE9 123 aa9.74□□□□□ -0.85
SOX2-OT-231ENST00000599082 PDPK1O15530 556 aa9.73□□□□□ -0.85
SOX2-OT-231ENST00000599082 CBFA2T2O43439 604 aa9.73□□□□□ -0.85
SOX2-OT-231ENST00000599082 ZNF865P0CJ78 1059 aaPredicted RBP9.73□□□□□ -0.85
SOX2-OT-231ENST00000599082 RASGRF1Q13972 1273 aa9.73□□□□□ -0.85
SOX2-OT-231ENST00000599082 NBPF9Q3BBW0 867 aa9.73□□□□□ -0.85
SOX2-OT-231ENST00000599082 HAUS7Q99871 368 aa9.73□□□□□ -0.85
SOX2-OT-231ENST00000599082 SUSD2Q9UGT4 822 aa9.73□□□□□ -0.85
SOX2-OT-231ENST00000599082 LOC105371045A0A1W2PR82 267 aa9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 SHOXO15266 292 aa9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 KIR3DL1P43629 444 aa9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 AUHQ13825 339 aaKnown RBP9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 ANKRD39Q53RE8 183 aa9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 NOP9Q86U38 636 aaKnown RBP9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 SLC51AQ86UW1 340 aa9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 ZDHHC13Q8IUH4 622 aa9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 C7orf61Q8IZ16 206 aa9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 MRFAP1L1Q96HT8 127 aa9.72□□□□□ -0.85
SOX2-OT-231ENST00000599082 SUSD5O60279 629 aa9.71□□□□□ -0.86
SOX2-OT-231ENST00000599082 EPHX1P07099 455 aa9.71□□□□□ -0.86
SOX2-OT-231ENST00000599082 CPSF6Q16630 551 aaKnown RBP eCLIP9.71□□□□□ -0.86
SOX2-OT-231ENST00000599082 EEPD1Q7L9B9 569 aa9.71□□□□□ -0.86
SOX2-OT-231ENST00000599082 DTWD2Q8NBA8 298 aa9.71□□□□□ -0.86
SOX2-OT-231ENST00000599082 KLHL25Q9H0H3 589 aa9.71□□□□□ -0.86
SOX2-OT-231ENST00000599082 CAPN6Q9Y6Q1 641 aa9.71□□□□□ -0.86
SOX2-OT-231ENST00000599082 OXCT1P55809 520 aa9.7□□□□□ -0.86
SOX2-OT-231ENST00000599082 SNW1Q13573 536 aaKnown RBP9.7□□□□□ -0.86
SOX2-OT-231ENST00000599082 HEATR6Q6AI08 1181 aaKnown RBP9.7□□□□□ -0.86
SOX2-OT-231ENST00000599082 GIMAP6Q6P9H5 292 aa9.7□□□□□ -0.86
SOX2-OT-231ENST00000599082 MFSD4AQ8N468 514 aa9.7□□□□□ -0.86
SOX2-OT-231ENST00000599082 FAM181AQ8N9Y4 354 aa9.7□□□□□ -0.86
SOX2-OT-231ENST00000599082 ZNF451Q9Y4E5 1061 aa9.7□□□□□ -0.86
SOX2-OT-231ENST00000599082 ANKRD34BA5PLL1 514 aa9.69□□□□□ -0.86
SOX2-OT-231ENST00000599082 PRR19A6NJB7 356 aa9.69□□□□□ -0.86
SOX2-OT-231ENST00000599082 GNAT3A8MTJ3 354 aa9.69□□□□□ -0.86
SOX2-OT-231ENST00000599082 CD247P20963 164 aa9.69□□□□□ -0.86
SOX2-OT-231ENST00000599082 ZNF143P52747 638 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-231ENST00000599082 TNK2Q07912 1038 aa9.69□□□□□ -0.86
SOX2-OT-231ENST00000599082 ST13P5Q8NFI4 369 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-231ENST00000599082 PRDM14Q9GZV8 571 aa9.69□□□□□ -0.86
SOX2-OT-231ENST00000599082 MKNK2Q9HBH9 465 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms