RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.64□□□□□ -1.51
HERC3-213ENST00000598772 PHF20L1A8MW92 1017 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 PROB1E7EW31 1015 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 SEPT4O43236 478 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 RARBP10826 455 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 HERVK_113P62684 666 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 NFIAQ12857 509 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 KRT24Q2M2I5 525 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 HDGFL1Q5TGJ6 251 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 FKBP1CQ5VVH2 108 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 APOBEC3HQ6NTF7 200 aaKnown RBP5.64□□□□□ -1.51
HERC3-213ENST00000598772 BMP8AQ7Z5Y6 402 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 CCDC191Q8NCU4 936 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 ZDHHC15Q96MV8 337 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 USP40Q9NVE5 1235 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 TMOD4Q9NZQ9 345 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 PHF24Q9UPV7 400 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 ARAP2Q8WZ64 1704 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 PLXNB2O15031 1838 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 GBF1Q92538 1859 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 SLC15A5A6NIM6 579 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 KIF28PB7ZC32 967 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 TLR3O15455 904 aaKnown RBP5.63□□□□□ -1.51
HERC3-213ENST00000598772 CTNND1O60716 968 aaKnown RBP5.63□□□□□ -1.51
HERC3-213ENST00000598772 CYBAP13498 195 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 PTPREP23469 700 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 TAP1Q03518 808 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 NFE2L2Q16236 605 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 HERC4Q5GLZ8 1057 aaPredicted RBP5.63□□□□□ -1.51
HERC3-213ENST00000598772 SPRED2Q7Z698 418 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 ADHFE1Q8IWW8 467 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 ZNF280CQ8ND82 737 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 NUP133Q8WUM0 1156 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 TOX2Q96NM4 488 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 TBX21Q9UL17 535 aa5.63□□□□□ -1.51
HERC3-213ENST00000598772 MAST4O15021 2626 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 MYO15AQ9UKN7 3530 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 ANKRD18BA2A2Z9 1011 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 FAM196BA6NMK8 535 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 ARHGEF15O94989 841 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 ZEB1P37275 1124 aaPredicted RBP5.62□□□□□ -1.51
HERC3-213ENST00000598772 ACLYP53396 1101 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 CCNA1P78396 465 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 HDLBPQ00341 1268 aaKnown RBP5.62□□□□□ -1.51
HERC3-213ENST00000598772 TAF7LQ5H9L4 462 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 AMER1Q5JTC6 1135 aaPredicted RBP5.62□□□□□ -1.51
HERC3-213ENST00000598772 CDC42EP5Q6NZY7 148 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 ANKRD33Q7Z3H0 272 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 UBE3BQ7Z3V4 1068 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 DEFB128Q7Z7B8 93 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 RPUSD2Q8IZ73 545 aaKnown RBP5.62□□□□□ -1.51
HERC3-213ENST00000598772 CRBNQ96SW2 442 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 ZBED2Q9BTP6 218 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 IRX2Q9BZI1 471 aaPredicted RBP5.62□□□□□ -1.51
HERC3-213ENST00000598772 CNNM1Q9NRU3 951 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 HYPKQ9NX55 129 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 PRKAG3Q9UGI9 489 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 USP24Q9UPU5 2620 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 FRMPD3Q5JV73 1810 aa5.62□□□□□ -1.51
HERC3-213ENST00000598772 STXBP3O00186 592 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 LPXNO60711 386 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 NBL1P41271 181 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 RGS3P49796 1198 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 PLXNA3P51805 1871 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 ZXDAP98168 799 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 DMWDQ09019 674 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 PICALMQ13492 652 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 MTMR2Q13614 643 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 TTLL4Q14679 1199 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 KCNA10Q16322 511 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 RSPO4Q2I0M5 234 aaPredicted RBP5.61□□□□□ -1.51
HERC3-213ENST00000598772 RFX7Q2KHR2 1363 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 C15orf52Q6ZUT6 534 aaKnown RBP5.61□□□□□ -1.51
HERC3-213ENST00000598772 LENG1Q96BZ8 264 aaPredicted RBP5.61□□□□□ -1.51
HERC3-213ENST00000598772 SCLYQ96I15 445 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 FAM84BQ96KN1 310 aaPredicted RBP5.61□□□□□ -1.51
HERC3-213ENST00000598772 POP1Q99575 1024 aaKnown RBP5.61□□□□□ -1.51
HERC3-213ENST00000598772 HIPK3Q9H422 1215 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 PHAXQ9H814 394 aaKnown RBP5.61□□□□□ -1.51
HERC3-213ENST00000598772 FAM198AQ9UFP1 575 aa5.61□□□□□ -1.51
HERC3-213ENST00000598772 UMODL1Q5DID0 1318 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 MROH7Q68CQ1 1323 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 USP17L5A8MUK1 530 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 TBC1D22AQ8WUA7 517 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 GLT1D1Q96MS3 346 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 FTOQ9C0B1 505 aaKnown RBP eCLIP5.6□□□□□ -1.51
HERC3-213ENST00000598772 AS3MTQ9HBK9 375 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 ALG13Q9NP73 1137 aaKnown RBP5.6□□□□□ -1.51
HERC3-213ENST00000598772 CLDND1Q9NY35 253 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 ZFYVE26Q68DK2 2539 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 CEP250Q9BV73 2442 aa5.6□□□□□ -1.51
HERC3-213ENST00000598772 GCN1Q92616 2671 aaKnown RBP5.6□□□□□ -1.51
HERC3-213ENST00000598772 NAV2Q8IVL1 2488 aa5.59□□□□□ -1.51
HERC3-213ENST00000598772 SMCHD1A6NHR9 2005 aa5.59□□□□□ -1.51
HERC3-213ENST00000598772 MAST3O60307 1309 aa5.59□□□□□ -1.51
HERC3-213ENST00000598772 SOBPA7XYQ1 873 aa5.59□□□□□ -1.51
HERC3-213ENST00000598772 PDGFBP01127 241 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms