RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 APOBEC3HQ6NTF7 200 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-216ENST00000598201 PIBF1Q8WXW3 757 aa19.64■□□□□ 0.73
SHKBP1-216ENST00000598201 TRIM44Q96DX7 344 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-216ENST00000598201 TMEM47Q9BQJ4 181 aa19.64■□□□□ 0.73
SHKBP1-216ENST00000598201 STX8Q9UNK0 236 aa19.64■□□□□ 0.73
SHKBP1-216ENST00000598201 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 LMNB1P20700 586 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 CDC42EP5Q6NZY7 148 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 HHIPL2Q6UWX4 724 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 NEDD1Q8NHV4 660 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 TEKT1Q969V4 418 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 USP25Q9UHP3 1055 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 SCN9AQ15858 1988 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 FAM205CA6NFA0 338 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 XBP1P17861 261 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 CMA1P23946 247 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 KIF5BP33176 963 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 GRM4Q14833 912 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 NPY5RQ15761 445 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 ANO6Q4KMQ2 910 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 EARS2Q5JPH6 523 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 DACT2Q5SW24 774 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 LARGE2Q8N3Y3 721 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 CLIC6Q96NY7 704 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 MAD2L2Q9UI95 211 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 PCDHAC2Q9Y5I4 1007 aa19.63■□□□□ 0.73
SHKBP1-216ENST00000598201 CTAGE5O15320 804 aa19.62■□□□□ 0.73
SHKBP1-216ENST00000598201 PFKFB1P16118 471 aa19.62■□□□□ 0.73
SHKBP1-216ENST00000598201 SLC35G1Q2M3R5 365 aa19.62■□□□□ 0.73
SHKBP1-216ENST00000598201 SASS6Q6UVJ0 657 aa19.62■□□□□ 0.73
SHKBP1-216ENST00000598201 KIAA0825Q8IV33 1275 aa19.62■□□□□ 0.73
SHKBP1-216ENST00000598201 CABP5Q9NP86 173 aa19.62■□□□□ 0.73
SHKBP1-216ENST00000598201 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-216ENST00000598201 CRKP46108 304 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 GABPAQ06546 454 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 RILPL1Q5EBL4 403 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 STRIP1Q5VSL9 837 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 SHC4Q6S5L8 630 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 RASGRP2Q7LDG7 609 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 FAM200AQ8TCP9 573 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 ERCC4Q92889 916 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 RRAGDQ9NQL2 400 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 MTMR7Q9Y216 660 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 PCDHB6Q9Y5E3 794 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 SCG2P13521 617 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 KRT2P35908 639 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 PFKFB3Q16875 520 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 JMYQ8N9B5 988 aa19.61■□□□□ 0.73
SHKBP1-216ENST00000598201 NFIAQ12857 509 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 NOM1Q5C9Z4 860 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 JDP2Q8WYK2 163 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 CEP95Q96GE4 821 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 AP5Z1O43299 807 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 ZNF202O95125 648 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 ATP2B1P20020 1258 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 LUZP1Q86V48 1076 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 TNFRSF25Q93038 417 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 DNAJC25Q9H1X3 360 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 CBX8Q9HC52 389 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 RNF181Q9P0P0 153 aa19.6■□□□□ 0.73
SHKBP1-216ENST00000598201 A0A087WWV3 80 aa19.59■□□□□ 0.73
SHKBP1-216ENST00000598201 ADAMTS3O15072 1205 aa19.59■□□□□ 0.73
SHKBP1-216ENST00000598201 C9orf131Q5VYM1 1079 aa19.59■□□□□ 0.73
SHKBP1-216ENST00000598201 ZDHHC15Q96MV8 337 aa19.59■□□□□ 0.73
SHKBP1-216ENST00000598201 OSBPL5Q9H0X9 879 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-216ENST00000598201 HPSEQ9Y251 543 aa19.59■□□□□ 0.73
SHKBP1-216ENST00000598201 ZNF646O15015 1829 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-216ENST00000598201 SBF1O95248 1867 aa19.59■□□□□ 0.73
SHKBP1-216ENST00000598201 CYTH3O43739 400 aa19.58■□□□□ 0.73
SHKBP1-216ENST00000598201 FKBP1AP62942 108 aaKnown RBP19.58■□□□□ 0.73
SHKBP1-216ENST00000598201 GRIN1Q05586 938 aa19.58■□□□□ 0.73
SHKBP1-216ENST00000598201 ZFPM1Q8IX07 1006 aa19.58■□□□□ 0.73
SHKBP1-216ENST00000598201 NIM1KQ8IY84 436 aa19.58■□□□□ 0.73
SHKBP1-216ENST00000598201 SDF4Q9BRK5 362 aa19.58■□□□□ 0.73
SHKBP1-216ENST00000598201 PALM3A6NDB9 673 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-216ENST00000598201 CUTAO60888 179 aa19.58■□□□□ 0.72
SHKBP1-216ENST00000598201 GOLGA8HP0CJ92 632 aa19.58■□□□□ 0.72
SHKBP1-216ENST00000598201 NOVP48745 357 aa19.58■□□□□ 0.72
SHKBP1-216ENST00000598201 RESP18Q5W5W9 173 aa19.58■□□□□ 0.72
SHKBP1-216ENST00000598201 FAM237AA0A1B0GTK4 181 aa19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 WNT7AO00755 349 aa19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 ADCY5O95622 1261 aa19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 SLURP2P0DP57 97 aa19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 AKR1B1P15121 316 aa19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 CACNB3P54284 484 aa19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 KRI1Q8N9T8 703 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 GPKOWQ92917 476 aaPredicted RBP eCLIP19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 FBXO2Q9UK22 296 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-216ENST00000598201 COL4A5P29400 1685 aa19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 YDJCA8MPS7 323 aa19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 GNAQP50148 359 aa19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 SPECC1Q5M775 1068 aa19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 C11orf57Q6ZUT1 292 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 MRIQ9BWK5 157 aa19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 SERPINB13Q9UIV8 391 aa19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 ESPNB1AK53 854 aa19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 TOP1P11387 765 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-216ENST00000598201 PTPREP23469 700 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms