RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 GSPT1P15170 499 aaKnown RBP18.38■□□□□ 0.53
XRCC1-206ENST00000597811 SBK1Q52WX2 424 aa18.38■□□□□ 0.53
XRCC1-206ENST00000597811 GPRC5AQ8NFJ5 357 aa18.38■□□□□ 0.53
XRCC1-206ENST00000597811 RNF208Q9H0X6 261 aa18.38■□□□□ 0.53
XRCC1-206ENST00000597811 GJD2Q9UKL4 321 aa18.38■□□□□ 0.53
XRCC1-206ENST00000597811 A0A0G2JMZ2 1700 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 AKR1B1P15121 316 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 ERVK-9P63128 1117 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 ERVK-24P63145 666 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 Q3C1V9 767 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 VPS53Q5VIR6 699 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 CATSPERGQ6ZRH7 1159 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 TMEM179Q6ZVK1 233 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 C16orf86Q6ZW13 317 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 CLEC10AQ8IUN9 316 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 PAGR1Q9BTK6 254 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 UNC93B1Q9H1C4 597 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 ZNF287Q9HBT7 754 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 CCDC171Q6TFL3 1326 aa18.37■□□□□ 0.53
XRCC1-206ENST00000597811 SLC34A2O95436 690 aa18.36■□□□□ 0.53
XRCC1-206ENST00000597811 GJB1P08034 283 aa18.36■□□□□ 0.53
XRCC1-206ENST00000597811 COL11A1P12107 1806 aaPredicted RBP18.36■□□□□ 0.53
XRCC1-206ENST00000597811 GJA8P48165 433 aa18.36■□□□□ 0.53
XRCC1-206ENST00000597811 GTF3C2Q8WUA4 911 aaPredicted RBP18.36■□□□□ 0.53
XRCC1-206ENST00000597811 PORCNQ9H237 461 aa18.36■□□□□ 0.53
XRCC1-206ENST00000597811 RPAP3Q9H6T3 665 aaPredicted RBP18.36■□□□□ 0.53
XRCC1-206ENST00000597811 CNMDO75829 334 aa18.35■□□□□ 0.53
XRCC1-206ENST00000597811 ATP2B2Q01814 1243 aa18.35■□□□□ 0.53
XRCC1-206ENST00000597811 PPARAQ07869 468 aa18.35■□□□□ 0.53
XRCC1-206ENST00000597811 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
XRCC1-206ENST00000597811 SKAP1Q86WV1 359 aa18.35■□□□□ 0.53
XRCC1-206ENST00000597811 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
XRCC1-206ENST00000597811 ZNF444Q8N0Y2 327 aaPredicted RBP18.35■□□□□ 0.53
XRCC1-206ENST00000597811 CCDC17Q96LX7 622 aa18.35■□□□□ 0.53
XRCC1-206ENST00000597811 MYH4Q9Y623 1939 aa18.35■□□□□ 0.53
XRCC1-206ENST00000597811 PDE4BQ07343 736 aa18.34■□□□□ 0.53
XRCC1-206ENST00000597811 KIAA1755Q5JYT7 1200 aa18.34■□□□□ 0.53
XRCC1-206ENST00000597811 NKX2-3Q8TAU0 364 aa18.34■□□□□ 0.53
XRCC1-206ENST00000597811 RUFY2Q8WXA3 655 aa18.34■□□□□ 0.53
XRCC1-206ENST00000597811 RABGAP1Q9Y3P9 1069 aa18.34■□□□□ 0.53
XRCC1-206ENST00000597811 SPDYE16A6NNV3 312 aaPredicted RBP18.33■□□□□ 0.52
XRCC1-206ENST00000597811 PRDM1O75626 825 aa18.33■□□□□ 0.52
XRCC1-206ENST00000597811 HSPD1P10809 573 aaKnown RBP18.33■□□□□ 0.52
XRCC1-206ENST00000597811 MAPK4P31152 587 aa18.33■□□□□ 0.52
XRCC1-206ENST00000597811 ICA1Q05084 483 aa18.33■□□□□ 0.52
XRCC1-206ENST00000597811 LBX2Q6XYB7 198 aa18.33■□□□□ 0.52
XRCC1-206ENST00000597811 GPR142Q7Z601 462 aa18.33■□□□□ 0.52
XRCC1-206ENST00000597811 U2AF1L4Q8WU68 220 aaKnown RBP18.33■□□□□ 0.52
XRCC1-206ENST00000597811 ARHGEF10LQ9HCE6 1279 aa18.33■□□□□ 0.52
XRCC1-206ENST00000597811 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
XRCC1-206ENST00000597811 PPP4R2Q9NY27 417 aa18.33■□□□□ 0.52
XRCC1-206ENST00000597811 RAD21O60216 631 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 HMGCRP04035 888 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 CYP2B6P20813 491 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 CTDSPL2Q05D32 466 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 TRIM32Q13049 653 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 TRIB2Q92519 343 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 NUDT12Q9BQG2 462 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 PAK6Q9NQU5 681 aaPredicted RBP18.32■□□□□ 0.52
XRCC1-206ENST00000597811 BTBD7Q9P203 1132 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 TMX2Q9Y320 296 aa18.32■□□□□ 0.52
XRCC1-206ENST00000597811 ROBO3Q96MS0 1386 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 SGPL1O95470 568 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 FGAP02671 866 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 ERICH6BQ5W0A0 696 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 UBE2Q1Q7Z7E8 422 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 CCAR1Q8IX12 1150 aaKnown RBP18.31■□□□□ 0.52
XRCC1-206ENST00000597811 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 USP6NLQ92738 828 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 ALPK3Q96L96 1907 aa18.31■□□□□ 0.52
XRCC1-206ENST00000597811 ZNFX1Q9P2E3 1918 aaKnown RBP18.31■□□□□ 0.52
XRCC1-206ENST00000597811 RANBP2P49792 3224 aaKnown RBP18.3■□□□□ 0.52
XRCC1-206ENST00000597811 TSPY3P0CV98 308 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 TSPY8P0CW00 308 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 RASA1P20936 1047 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 HAND2P61296 217 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 ALX1Q15699 326 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 MORN1Q5T089 497 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 PLEKHH3Q7Z736 793 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 SPICE1Q8N0Z3 855 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 LPAR1Q92633 364 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.3■□□□□ 0.52
XRCC1-206ENST00000597811 TANGO6Q9C0B7 1094 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 SH2D4AQ9H788 454 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 VCPKMTQ9H867 229 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 KANSL2Q9H9L4 492 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 FRMPD3Q5JV73 1810 aa18.3■□□□□ 0.52
XRCC1-206ENST00000597811 ZNF236Q9UL36 1845 aa18.29■□□□□ 0.52
XRCC1-206ENST00000597811 FOXP2O15409 715 aa18.29■□□□□ 0.52
XRCC1-206ENST00000597811 XRCC5P13010 732 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms