RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	CUL4A	Q13619	759 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	SBK1	Q52WX2	424 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	CERS5	Q8N5B7	392 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	JMY	Q8N9B5	988 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	STAG1	Q8WVM7	1258 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	AGXT2	Q9BYV1	514 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	LZTFL1	Q9NQ48	299 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	RIOK3	O14730	519 aa	Known RBP	11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	MCM7	P33993	719 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	MMP14	P50281	582 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	EXOSC10	Q01780	885 aa	Known RBP	11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	MTA3	Q9BTC8	594 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	RNF41	Q9H4P4	317 aa	Predicted RBP	11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	MCM9	Q9NXL9	1143 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777		V9GY48	417 aa	Predicted RBP	11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	TPM1	P09493	284 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	CCT6A	P40227	531 aa	Known RBP	11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	UBASH3A	P57075	661 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	PNOC	Q13519	176 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	SYT10	Q6XYQ8	523 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	NBPF3	Q9H094	633 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	TAOK3	Q9H2K8	898 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	BRMS1	Q9HCU9	246 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	PDE4DIP	Q5VU43	2346 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	COL4A5	P29400	1685 aa		11.19	□□□□□ -0.62
FARP1-222	ENST00000597777	VWA3A	A6NCI4	1184 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	BTBD18	B2RXH4	712 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	MATR3	P43243	847 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	RAD51AP2	Q09MP3	1159 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	STX1A	Q16623	288 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	RTN1	Q16799	776 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	KRT23	Q9C075	422 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	CPVL	Q9H3G5	476 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	MKRN1	Q9UHC7	482 aa	Known RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	ROBO3	Q96MS0	1386 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	FGR	P09769	529 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	BTD	P43251	543 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	DIXDC1	Q155Q3	683 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	UBA5	Q9GZZ9	404 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	MRVI1	Q9Y6F6	885 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	PPARA	Q07869	468 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	AKNAD1	Q5T1N1	836 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	ILDR2	Q71H61	639 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	PPFIBP1	Q86W92	1011 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	IQCA1	Q86XH1	822 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	TBC1D10C	Q8IV04	446 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	LARGE2	Q8N3Y3	721 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	CTCFL	Q8NI51	663 aa	Predicted RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	GTF3C6	Q969F1	213 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	TEKT1	Q969V4	418 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	HOOK1	Q9UJC3	728 aa	Known RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	SERPINA10	Q9UK55	444 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	TTF2	Q9UNY4	1162 aa	Known RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	DAGLA	Q9Y4D2	1042 aa		11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.18	□□□□□ -0.62
FARP1-222	ENST00000597777	POLR2D	O15514	142 aa	Known RBP	11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	GOLGA8H	P0CJ92	632 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	NDUFA8	P51970	172 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	GNG11	P61952	73 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	NIM1K	Q8IY84	436 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	BLZF1	Q9H2G9	400 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	ZNRF3	Q9ULT6	936 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	YDJC	A8MPS7	323 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	IPO7	O95373	1038 aa	Known RBP	11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	NR5A1	Q13285	461 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	HEATR3	Q7Z4Q2	680 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	CAGE1	Q8TC20	777 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	ZDHHC15	Q96MV8	337 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	CCDC94	Q9BW85	323 aa	Predicted RBP	11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	ADAMTSL1	Q8N6G6	1762 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	VIL1	P09327	827 aa	Known RBP	11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	TOB2	Q14106	344 aa	Predicted RBP	11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	IFIT1B	Q5T764	474 aa	Known RBP	11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	CEP135	Q66GS9	1140 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	CTR9	Q6PD62	1173 aa		11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.17	□□□□□ -0.62
FARP1-222	ENST00000597777	PHACTR2	O75167	634 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	CDKL5	O76039	1030 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	EVC	P57679	992 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	RHBDL3	P58872	404 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	DIS3L2	Q8IYB7	885 aa	Known RBP	11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	MYRIP	Q8NFW9	859 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	RASGRP4	Q8TDF6	673 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	DICER1	Q9UPY3	1922 aa	Known RBP	11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	NFKBIE	O00221	500 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	KRT18	P05783	430 aa	Known RBP	11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	KRT40	Q6A162	431 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	CDK5RAP3	Q96JB5	506 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	DESI2	Q9BSY9	194 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	NPM3	O75607	178 aa	Known RBP	11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	PDIA4	P13667	645 aa	Known RBP	11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	PDIA3	P30101	505 aa	Known RBP	11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	ARID5A	Q03989	594 aa		11.16	□□□□□ -0.62

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