RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 RANBP6O60518 1105 aaKnown RBP21.44■■□□□ 1.02
IRF3-216ENST00000597180 NT5C2P49902 561 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 IRX3P78415 501 aaPredicted RBP21.44■■□□□ 1.02
IRF3-216ENST00000597180 ATP2B2Q01814 1243 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L24Q0WX57 530 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 MKL1Q969V6 931 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 SYNPO2Q9UMS6 1093 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 U3KPZ7 1027 aaPredicted RBP21.44■■□□□ 1.02
IRF3-216ENST00000597180 A0A0G2JMZ2 1700 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 TTLL1O95922 423 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 GCLCP48506 637 aaPredicted RBP21.43■■□□□ 1.02
IRF3-216ENST00000597180 PPP4R3BQ5MIZ7 849 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 CATSPERGQ6ZRH7 1159 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 CTU1Q7Z7A3 348 aaKnown RBP21.43■■□□□ 1.02
IRF3-216ENST00000597180 MAP4K1Q92918 833 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 RPAP3Q9H6T3 665 aaPredicted RBP21.43■■□□□ 1.02
IRF3-216ENST00000597180 GOPCQ9HD26 462 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 IL17RBQ9NRM6 502 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 TOMM22Q9NS69 142 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 NEDD4P46934 1319 aa21.43■■□□□ 1.02
IRF3-216ENST00000597180 NOVP48745 357 aa21.42■■□□□ 1.02
IRF3-216ENST00000597180 LACTBP83111 547 aaPredicted RBP21.42■■□□□ 1.02
IRF3-216ENST00000597180 RRP12Q5JTH9 1297 aaKnown RBP21.42■■□□□ 1.02
IRF3-216ENST00000597180 CASC1Q6TDU7 716 aa21.42■■□□□ 1.02
IRF3-216ENST00000597180 KIAA1211Q6ZU35 1233 aa21.42■■□□□ 1.02
IRF3-216ENST00000597180 CD99L2Q8TCZ2 262 aa21.42■■□□□ 1.02
IRF3-216ENST00000597180 P2RX7Q99572 595 aaKnown RBP21.42■■□□□ 1.02
IRF3-216ENST00000597180 LSG1Q9H089 658 aaKnown RBP21.42■■□□□ 1.02
IRF3-216ENST00000597180 CLIP2Q9UDT6 1046 aa21.42■■□□□ 1.02
IRF3-216ENST00000597180 WDR46O15213 610 aaKnown RBP21.41■■□□□ 1.02
IRF3-216ENST00000597180 HERVK_113P62684 666 aa21.41■■□□□ 1.02
IRF3-216ENST00000597180 CAP1Q01518 475 aa21.41■■□□□ 1.02
IRF3-216ENST00000597180 TCP11L1Q9NUJ3 509 aa21.41■■□□□ 1.02
IRF3-216ENST00000597180 DOCK3Q8IZD9 2030 aa21.41■■□□□ 1.02
IRF3-216ENST00000597180 COL11A1P12107 1806 aaPredicted RBP21.41■■□□□ 1.02
IRF3-216ENST00000597180 FAM110CQ1W6H9 321 aa21.4■■□□□ 1.02
IRF3-216ENST00000597180 LBX2Q6XYB7 198 aa21.4■■□□□ 1.02
IRF3-216ENST00000597180 SPICE1Q8N0Z3 855 aa21.4■■□□□ 1.02
IRF3-216ENST00000597180 ANKRD13CQ8N6S4 541 aa21.4■■□□□ 1.02
IRF3-216ENST00000597180 NKX2-3Q8TAU0 364 aa21.4■■□□□ 1.02
IRF3-216ENST00000597180 GTF3C2Q8WUA4 911 aaPredicted RBP21.4■■□□□ 1.02
IRF3-216ENST00000597180 ESR2Q92731 530 aa21.4■■□□□ 1.02
IRF3-216ENST00000597180 NMT2O60551 498 aa21.39■■□□□ 1.01
IRF3-216ENST00000597180 CYP21A2P08686 494 aa21.39■■□□□ 1.01
IRF3-216ENST00000597180 GMCL1P1Q8NEA9 526 aa21.39■■□□□ 1.01
IRF3-216ENST00000597180 MORF4L1Q9UBU8 362 aa21.39■■□□□ 1.01
IRF3-216ENST00000597180 RBM8AQ9Y5S9 174 aaKnown RBP21.39■■□□□ 1.01
IRF3-216ENST00000597180 F5H6K3 240 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 NDUFB10O96000 172 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 KLRC3Q07444 240 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 KIF22Q14807 665 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 ARHGEF6Q15052 776 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 PKN2Q16513 984 aaKnown RBP21.38■■□□□ 1.01
IRF3-216ENST00000597180 POTEEQ6S8J3 1075 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 OTOP1Q7RTM1 612 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 KRT23Q9C075 422 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 TANGO6Q9C0B7 1094 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 ARHGAP39Q9C0H5 1083 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 CNNM2Q9H8M5 875 aa21.38■■□□□ 1.01
IRF3-216ENST00000597180 MYPNQ86TC9 1320 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 SPDYE16A6NNV3 312 aaPredicted RBP21.37■■□□□ 1.01
IRF3-216ENST00000597180 B4E1Z4 1266 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 CTGFP29279 349 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 COG2Q14746 738 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 TNS4Q8IZW8 715 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 LRRC47Q8N1G4 583 aaKnown RBP21.37■■□□□ 1.01
IRF3-216ENST00000597180 MCOLN1Q9GZU1 580 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 EFCC1Q9HA90 598 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 ANO2Q9NQ90 1003 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 RBPJLQ9UBG7 517 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 STX8Q9UNK0 236 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 TRIM17Q9Y577 477 aa21.37■■□□□ 1.01
IRF3-216ENST00000597180 KDM4AO75164 1064 aa21.36■■□□□ 1.01
IRF3-216ENST00000597180 GNRH1P01148 92 aa21.36■■□□□ 1.01
IRF3-216ENST00000597180 TXNRD2Q9NNW7 524 aa21.36■■□□□ 1.01
IRF3-216ENST00000597180 HOXC10Q9NYD6 342 aa21.36■■□□□ 1.01
IRF3-216ENST00000597180 PSMC4P43686 418 aa21.35■■□□□ 1.01
IRF3-216ENST00000597180 FAM83BQ5T0W9 1011 aa21.35■■□□□ 1.01
IRF3-216ENST00000597180 RCSD1Q6JBY9 416 aa21.35■■□□□ 1.01
IRF3-216ENST00000597180 TRIM47Q96LD4 638 aa21.35■■□□□ 1.01
IRF3-216ENST00000597180 TTC14Q96N46 770 aa21.35■■□□□ 1.01
IRF3-216ENST00000597180 RABGAP1Q9Y3P9 1069 aa21.35■■□□□ 1.01
IRF3-216ENST00000597180 PLXNB2O15031 1838 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 RAD21O60216 631 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 CNMDO75829 334 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 FLOT1O75955 427 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 TOP1P11387 765 aaKnown RBP21.34■■□□□ 1.01
IRF3-216ENST00000597180 DSG3P32926 999 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 FCGRTP55899 365 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 ERVK-9P63128 1117 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 ERVK-24P63145 666 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 CCDC178Q5BJE1 867 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 SLFN13Q68D06 897 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 GPRC5AQ8NFJ5 357 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 NUP88Q99567 741 aaPredicted RBP21.34■■□□□ 1.01
IRF3-216ENST00000597180 ZSWIM5Q9P217 1185 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 TAF6LQ9Y6J9 622 aa21.34■■□□□ 1.01
IRF3-216ENST00000597180 E7EWF7 191 aa21.33■■□□□ 1.01
IRF3-216ENST00000597180 FBXO46Q6PJ61 603 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms