RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 COL11A1P12107 1806 aaPredicted RBP19.03■□□□□ 0.64
LIG1-214ENST00000597146 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
LIG1-214ENST00000597146 ARID4AP29374 1257 aaPredicted RBP19.03■□□□□ 0.64
LIG1-214ENST00000597146 MCAMP43121 646 aa19.03■□□□□ 0.64
LIG1-214ENST00000597146 NAA16Q6N069 864 aaPredicted RBP19.03■□□□□ 0.64
LIG1-214ENST00000597146 ACER1Q8TDN7 264 aa19.03■□□□□ 0.64
LIG1-214ENST00000597146 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.03■□□□□ 0.64
LIG1-214ENST00000597146 MOV10L1Q9BXT6 1211 aaKnown RBP19.03■□□□□ 0.64
LIG1-214ENST00000597146 PBX4Q9BYU1 374 aa19.03■□□□□ 0.64
LIG1-214ENST00000597146 RPAP3Q9H6T3 665 aaPredicted RBP19.03■□□□□ 0.64
LIG1-214ENST00000597146 AKAP2Q9Y2D5 859 aa19.03■□□□□ 0.64
LIG1-214ENST00000597146 RAB3GAP1Q15042 981 aa19.02■□□□□ 0.64
LIG1-214ENST00000597146 IL27Q8NEV9 243 aa19.02■□□□□ 0.64
LIG1-214ENST00000597146 TMEM39AQ9NV64 488 aa19.02■□□□□ 0.64
LIG1-214ENST00000597146 A0A1W2PQ45 241 aaPredicted RBP19.01■□□□□ 0.63
LIG1-214ENST00000597146 A0A1W2PQY0 241 aa19.01■□□□□ 0.63
LIG1-214ENST00000597146 BAG3O95817 575 aa19.01■□□□□ 0.63
LIG1-214ENST00000597146 HLA-DOAP06340 250 aa19.01■□□□□ 0.63
LIG1-214ENST00000597146 GORABQ5T7V8 394 aa19.01■□□□□ 0.63
LIG1-214ENST00000597146 CCDC129Q6ZRS4 1044 aa19.01■□□□□ 0.63
LIG1-214ENST00000597146 KIAA1683Q9H0B3 1180 aa19.01■□□□□ 0.63
LIG1-214ENST00000597146 XPNPEP3Q9NQH7 507 aa19.01■□□□□ 0.63
LIG1-214ENST00000597146 PIEZO1Q92508 2521 aa19■□□□□ 0.63
LIG1-214ENST00000597146 PGK1P00558 417 aa19■□□□□ 0.63
LIG1-214ENST00000597146 PLCG2P16885 1265 aa19■□□□□ 0.63
LIG1-214ENST00000597146 ERCC3P19447 782 aa19■□□□□ 0.63
LIG1-214ENST00000597146 USP14P54578 494 aa19■□□□□ 0.63
LIG1-214ENST00000597146 LENG1Q96BZ8 264 aaPredicted RBP19■□□□□ 0.63
LIG1-214ENST00000597146 SNRKQ9NRH2 765 aa19■□□□□ 0.63
LIG1-214ENST00000597146 NAV1Q8NEY1 1877 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 TRANK1O15050 2925 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 IGFBP4P22692 258 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 PPP4CP60510 307 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 FAAP100Q0VG06 881 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 DIEXFQ68CQ4 756 aaKnown RBP18.99■□□□□ 0.63
LIG1-214ENST00000597146 SLC44A5Q8NCS7 719 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 MAML3Q96JK9 1138 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 C1QTNF1Q9BXJ1 281 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 SPATC1LQ9H0A9 340 aa18.99■□□□□ 0.63
LIG1-214ENST00000597146 STRNO43815 780 aa18.98■□□□□ 0.63
LIG1-214ENST00000597146 RARBP10826 455 aa18.98■□□□□ 0.63
LIG1-214ENST00000597146 DYNLL1P63167 89 aaKnown RBP18.98■□□□□ 0.63
LIG1-214ENST00000597146 TATDN1Q6P1N9 297 aa18.98■□□□□ 0.63
LIG1-214ENST00000597146 MEIS3Q99687 375 aa18.98■□□□□ 0.63
LIG1-214ENST00000597146 SYNGAP1Q96PV0 1343 aa18.98■□□□□ 0.63
LIG1-214ENST00000597146 E9PSI1 815 aa18.97■□□□□ 0.63
LIG1-214ENST00000597146 ATF7IPQ6VMQ6 1270 aa18.97■□□□□ 0.63
LIG1-214ENST00000597146 C16orf59Q7L2K0 433 aa18.97■□□□□ 0.63
LIG1-214ENST00000597146 MUC6Q6W4X9 2439 aa18.97■□□□□ 0.63
LIG1-214ENST00000597146 MYH8P13535 1937 aa18.97■□□□□ 0.63
LIG1-214ENST00000597146 ABCB5Q2M3G0 1257 aa18.96■□□□□ 0.63
LIG1-214ENST00000597146 TMEM240Q5SV17 173 aa18.96■□□□□ 0.63
LIG1-214ENST00000597146 ANKRD33Q7Z3H0 272 aa18.96■□□□□ 0.63
LIG1-214ENST00000597146 RNF180Q86T96 592 aa18.96■□□□□ 0.63
LIG1-214ENST00000597146 SHCBP1Q8NEM2 672 aa18.96■□□□□ 0.63
LIG1-214ENST00000597146 LRRC37A2A6NM11 1700 aa18.96■□□□□ 0.63
LIG1-214ENST00000597146 ZNF521Q96K83 1311 aa18.96■□□□□ 0.63
LIG1-214ENST00000597146 SRGAP3O43295 1099 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 TIMP1P01033 207 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 BMP1P13497 986 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 TAL1P17542 331 aaPredicted RBP18.95■□□□□ 0.62
LIG1-214ENST00000597146 GUCY1A2P33402 732 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 TFF2Q03403 129 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 PLS1Q14651 629 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 RASIP1Q5U651 963 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 NCAPG2Q86XI2 1143 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 LRFN3Q9BTN0 628 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 TANGO6Q9C0B7 1094 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 SLC5A4Q9NY91 659 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 TBX21Q9UL17 535 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 HCN4Q9Y3Q4 1203 aa18.95■□□□□ 0.62
LIG1-214ENST00000597146 ROBO3Q96MS0 1386 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 DCDC2CA8MYV0 355 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 ACRP10323 421 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 KCNQ1P51787 676 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 CERKLQ49MI3 558 aaPredicted RBP18.94■□□□□ 0.62
LIG1-214ENST00000597146 MFSD5Q6N075 450 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 MICALL1Q8N3F8 863 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 TOX2Q96NM4 488 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 NKX2-4Q9H2Z4 354 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 STARD7Q9NQZ5 370 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 SMC4Q9NTJ3 1288 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 CXXC1Q9P0U4 656 aaPredicted RBP18.94■□□□□ 0.62
LIG1-214ENST00000597146 SERPINB13Q9UIV8 391 aa18.94■□□□□ 0.62
LIG1-214ENST00000597146 ADAMTS4O75173 837 aa18.93■□□□□ 0.62
LIG1-214ENST00000597146 CSF2RAP15509 400 aa18.93■□□□□ 0.62
LIG1-214ENST00000597146 PPIGQ13427 754 aaKnown RBP eCLIP18.93■□□□□ 0.62
LIG1-214ENST00000597146 COG2Q14746 738 aa18.93■□□□□ 0.62
LIG1-214ENST00000597146 CDCA7LQ96GN5 454 aa18.93■□□□□ 0.62
LIG1-214ENST00000597146 EPHX3Q9H6B9 360 aa18.93■□□□□ 0.62
LIG1-214ENST00000597146 PRRC2BQ5JSZ5 2229 aaKnown RBP18.92■□□□□ 0.62
LIG1-214ENST00000597146 A0A1W2PRG0 241 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 CYP2E1P05181 493 aaPredicted RBP18.92■□□□□ 0.62
LIG1-214ENST00000597146 PGK2P07205 417 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 SHMT1P34896 483 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 ACLYP53396 1101 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 SEPT2Q15019 361 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 KIAA1755Q5JYT7 1200 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 ABRAQ8N0Z2 381 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms