RNA–Protein interactions for RNA: ENST00000597088.1

PRKD2-207, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-207ENST00000597088 USP17L17D6RBQ6 530 aa28.71■■■□□ 2.19
PRKD2-207ENST00000597088 USP17L19D6RCP7 530 aa28.71■■■□□ 2.19
PRKD2-207ENST00000597088 USP17L20D6RJB6 530 aa28.71■■■□□ 2.19
PRKD2-207ENST00000597088 PCP11498 1178 aaKnown RBP28.71■■■□□ 2.19
PRKD2-207ENST00000597088 USP17L24Q0WX57 530 aa28.71■■■□□ 2.19
PRKD2-207ENST00000597088 SPICE1Q8N0Z3 855 aa28.71■■■□□ 2.19
PRKD2-207ENST00000597088 LPAR1Q92633 364 aa28.71■■■□□ 2.19
PRKD2-207ENST00000597088 CLIP2Q9UDT6 1046 aa28.71■■■□□ 2.19
PRKD2-207ENST00000597088 CAP1Q01518 475 aa28.7■■■□□ 2.18
PRKD2-207ENST00000597088 CTU1Q7Z7A3 348 aaKnown RBP28.7■■■□□ 2.18
PRKD2-207ENST00000597088 P2RX7Q99572 595 aaKnown RBP28.7■■■□□ 2.18
PRKD2-207ENST00000597088 GOPCQ9HD26 462 aa28.7■■■□□ 2.18
PRKD2-207ENST00000597088 U3KPZ7 1027 aaPredicted RBP28.7■■■□□ 2.18
PRKD2-207ENST00000597088 NMT2O60551 498 aa28.69■■■□□ 2.18
PRKD2-207ENST00000597088 TTLL1O95922 423 aa28.69■■■□□ 2.18
PRKD2-207ENST00000597088 HERVK_113P62684 666 aa28.69■■■□□ 2.18
PRKD2-207ENST00000597088 LACTBP83111 547 aaPredicted RBP28.69■■■□□ 2.18
PRKD2-207ENST00000597088 CATSPERGQ6ZRH7 1159 aa28.69■■■□□ 2.18
PRKD2-207ENST00000597088 GCLCP48506 637 aaPredicted RBP28.68■■■□□ 2.18
PRKD2-207ENST00000597088 CASC1Q6TDU7 716 aa28.68■■■□□ 2.18
PRKD2-207ENST00000597088 KIAA1211Q6ZU35 1233 aa28.68■■■□□ 2.18
PRKD2-207ENST00000597088 TNS4Q8IZW8 715 aa28.68■■■□□ 2.18
PRKD2-207ENST00000597088 ANKRD13CQ8N6S4 541 aa28.68■■■□□ 2.18
PRKD2-207ENST00000597088 NKX2-3Q8TAU0 364 aa28.68■■■□□ 2.18
PRKD2-207ENST00000597088 TANGO6Q9C0B7 1094 aa28.68■■■□□ 2.18
PRKD2-207ENST00000597088 IL17RBQ9NRM6 502 aa28.68■■■□□ 2.18
PRKD2-207ENST00000597088 PARP14Q460N5 1801 aa28.67■■■□□ 2.18
PRKD2-207ENST00000597088 RAD21O60216 631 aa28.67■■■□□ 2.18
PRKD2-207ENST00000597088 ECM2O94769 699 aaPredicted RBP28.67■■■□□ 2.18
PRKD2-207ENST00000597088 LRRC47Q8N1G4 583 aaKnown RBP28.67■■■□□ 2.18
PRKD2-207ENST00000597088 MAP4K1Q92918 833 aa28.67■■■□□ 2.18
PRKD2-207ENST00000597088 ARHGAP39Q9C0H5 1083 aa28.67■■■□□ 2.18
PRKD2-207ENST00000597088 LSG1Q9H089 658 aaKnown RBP28.67■■■□□ 2.18
PRKD2-207ENST00000597088 RLFQ13129 1914 aa28.67■■■□□ 2.18
PRKD2-207ENST00000597088 MGAMO43451 1857 aa28.66■■■□□ 2.18
PRKD2-207ENST00000597088 WDR46O15213 610 aaKnown RBP28.66■■■□□ 2.18
PRKD2-207ENST00000597088 MKL1Q969V6 931 aa28.66■■■□□ 2.18
PRKD2-207ENST00000597088 TRIM17Q9Y577 477 aa28.66■■■□□ 2.18
PRKD2-207ENST00000597088 KIF22Q14807 665 aa28.65■■■□□ 2.18
PRKD2-207ENST00000597088 FAM110CQ1W6H9 321 aa28.65■■■□□ 2.18
PRKD2-207ENST00000597088 OTOP1Q7RTM1 612 aa28.65■■■□□ 2.18
PRKD2-207ENST00000597088 ESR2Q92731 530 aa28.65■■■□□ 2.18
PRKD2-207ENST00000597088 MCOLN1Q9GZU1 580 aa28.65■■■□□ 2.18
PRKD2-207ENST00000597088 ANO2Q9NQ90 1003 aa28.65■■■□□ 2.18
PRKD2-207ENST00000597088 STX8Q9UNK0 236 aa28.65■■■□□ 2.18
PRKD2-207ENST00000597088 RBM8AQ9Y5S9 174 aaKnown RBP28.65■■■□□ 2.18
PRKD2-207ENST00000597088 F5H6K3 240 aa28.64■■■□□ 2.18
PRKD2-207ENST00000597088 NDUFB10O96000 172 aa28.64■■■□□ 2.18
PRKD2-207ENST00000597088 CYP21A2P08686 494 aa28.64■■■□□ 2.18
PRKD2-207ENST00000597088 CTGFP29279 349 aa28.64■■■□□ 2.18
PRKD2-207ENST00000597088 KLRC3Q07444 240 aa28.64■■■□□ 2.18
PRKD2-207ENST00000597088 PPP4R3BQ5MIZ7 849 aa28.64■■■□□ 2.18
PRKD2-207ENST00000597088 EFCC1Q9HA90 598 aa28.64■■■□□ 2.18
PRKD2-207ENST00000597088 SYNPO2Q9UMS6 1093 aa28.64■■■□□ 2.18
PRKD2-207ENST00000597088 A0A0G2JMZ2 1700 aa28.63■■■□□ 2.17
PRKD2-207ENST00000597088 B4E1Z4 1266 aa28.63■■■□□ 2.17
PRKD2-207ENST00000597088 PEX10O60683 326 aa28.63■■■□□ 2.17
PRKD2-207ENST00000597088 FAM83BQ5T0W9 1011 aa28.63■■■□□ 2.17
PRKD2-207ENST00000597088 POTEEQ6S8J3 1075 aa28.63■■■□□ 2.17
PRKD2-207ENST00000597088 NUP88Q99567 741 aaPredicted RBP28.63■■■□□ 2.17
PRKD2-207ENST00000597088 TXNRD2Q9NNW7 524 aa28.63■■■□□ 2.17
PRKD2-207ENST00000597088 MORF4L1Q9UBU8 362 aa28.63■■■□□ 2.17
PRKD2-207ENST00000597088 KDM4AO75164 1064 aa28.62■■■□□ 2.17
PRKD2-207ENST00000597088 PSMC4P43686 418 aa28.62■■■□□ 2.17
PRKD2-207ENST00000597088 GMCL1P1Q8NEA9 526 aa28.62■■■□□ 2.17
PRKD2-207ENST00000597088 GTF3C2Q8WUA4 911 aaPredicted RBP28.62■■■□□ 2.17
PRKD2-207ENST00000597088 TRIM47Q96LD4 638 aa28.62■■■□□ 2.17
PRKD2-207ENST00000597088 PAGR1Q9BTK6 254 aa28.62■■■□□ 2.17
PRKD2-207ENST00000597088 CNNM2Q9H8M5 875 aa28.62■■■□□ 2.17
PRKD2-207ENST00000597088 TCP11L1Q9NUJ3 509 aa28.62■■■□□ 2.17
PRKD2-207ENST00000597088 TAF6LQ9Y6J9 622 aa28.62■■■□□ 2.17
PRKD2-207ENST00000597088 SPDYE16A6NNV3 312 aaPredicted RBP28.61■■■□□ 2.17
PRKD2-207ENST00000597088 NOVP48745 357 aa28.61■■■□□ 2.17
PRKD2-207ENST00000597088 ARHGEF6Q15052 776 aa28.61■■■□□ 2.17
PRKD2-207ENST00000597088 KRT23Q9C075 422 aa28.61■■■□□ 2.17
PRKD2-207ENST00000597088 RBPJLQ9UBG7 517 aa28.61■■■□□ 2.17
PRKD2-207ENST00000597088 FLOT1O75955 427 aa28.6■■■□□ 2.17
PRKD2-207ENST00000597088 NT5C2P49902 561 aa28.6■■■□□ 2.17
PRKD2-207ENST00000597088 COG2Q14746 738 aa28.6■■■□□ 2.17
PRKD2-207ENST00000597088 FMNL1O95466 1100 aaPredicted RBP28.59■■■□□ 2.17
PRKD2-207ENST00000597088 FCGRTP55899 365 aa28.59■■■□□ 2.17
PRKD2-207ENST00000597088 PKN2Q16513 984 aaKnown RBP28.59■■■□□ 2.17
PRKD2-207ENST00000597088 LBX2Q6XYB7 198 aa28.59■■■□□ 2.17
PRKD2-207ENST00000597088 GPRC5AQ8NFJ5 357 aa28.59■■■□□ 2.17
PRKD2-207ENST00000597088 ZKSCAN3Q9BRR0 538 aa28.59■■■□□ 2.17
PRKD2-207ENST00000597088 FBXO28Q9NVF7 368 aa28.59■■■□□ 2.17
PRKD2-207ENST00000597088 CNMDO75829 334 aa28.58■■■□□ 2.17
PRKD2-207ENST00000597088 ERVK-9P63128 1117 aa28.58■■■□□ 2.17
PRKD2-207ENST00000597088 ERVK-24P63145 666 aa28.58■■■□□ 2.17
PRKD2-207ENST00000597088 SLFN13Q68D06 897 aa28.58■■■□□ 2.17
PRKD2-207ENST00000597088 SAMD1Q6SPF0 538 aaPredicted RBP28.58■■■□□ 2.17
PRKD2-207ENST00000597088 HOXC10Q9NYD6 342 aa28.58■■■□□ 2.17
PRKD2-207ENST00000597088 ZSWIM5Q9P217 1185 aa28.58■■■□□ 2.17
PRKD2-207ENST00000597088 HTTP42858 3142 aa28.57■■■□□ 2.16
PRKD2-207ENST00000597088 E7EWF7 191 aa28.57■■■□□ 2.16
PRKD2-207ENST00000597088 DSG3P32926 999 aa28.57■■■□□ 2.16
PRKD2-207ENST00000597088 RCSD1Q6JBY9 416 aa28.57■■■□□ 2.16
PRKD2-207ENST00000597088 STOX1Q6ZVD7 989 aa28.57■■■□□ 2.16
PRKD2-207ENST00000597088 CHMP4CQ96CF2 233 aa28.57■■■□□ 2.16
PRKD2-207ENST00000597088 ATG4CQ96DT6 458 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms