RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 SIAH1Q8IUQ4 282 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 NUP133Q8WUM0 1156 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 HHIPL1Q96JK4 782 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 NUP88Q99567 741 aaPredicted RBP10.92□□□□□ -0.66
ZNF548-206ENST00000597047 TANGO6Q9C0B7 1094 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 SENP2Q9HC62 589 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 GPCPD1Q9NPB8 672 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 EMILIN3Q9NT22 766 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 NYAP2Q9P242 653 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 FRMPD2Q68DX3 1309 aaPredicted RBP10.91□□□□□ -0.66
ZNF548-206ENST00000597047 IGKV6D-41A0A0C4DH26 115 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 C19orf81C9J6K1 198 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 F5H6K3 240 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 EPB41L2O43491 1005 aaKnown RBP10.91□□□□□ -0.66
ZNF548-206ENST00000597047 HMGB1P09429 215 aaKnown RBP10.91□□□□□ -0.66
ZNF548-206ENST00000597047 TOP1P11387 765 aaKnown RBP10.91□□□□□ -0.66
ZNF548-206ENST00000597047 RPS6KB1P23443 525 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 SLC4A3P48751 1232 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 NEK4P51957 841 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 USP14P54578 494 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 KLRC3Q07444 240 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 SREBF2Q12772 1141 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 TSGA10IPQ3SY00 556 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 TREML2Q5T2D2 321 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 RUFY3Q7L099 469 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 FASTKD5Q7L8L6 764 aaKnown RBP10.91□□□□□ -0.66
ZNF548-206ENST00000597047 CCDC144CPQ8IYA2 1237 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 ENAHQ8N8S7 591 aaPredicted RBP10.91□□□□□ -0.66
ZNF548-206ENST00000597047 BRI3BPQ8WY22 251 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 KCNB2Q92953 911 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 PDRG1Q9NUG6 133 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 TMX2Q9Y320 296 aa10.91□□□□□ -0.66
ZNF548-206ENST00000597047 A0A0G2JLL6 359 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-206ENST00000597047 BTBD19C9JJ37 291 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 NDUFB10O96000 172 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 GOLGA8HP0CJ92 632 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 APOBRQ0VD83 1088 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 KIAA1755Q5JYT7 1200 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 OTUD7BQ6GQQ9 843 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 SYNE3Q6ZMZ3 975 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 KCTD1Q719H9 257 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 RASGRP2Q7LDG7 609 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 PRRT2Q7Z6L0 340 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-206ENST00000597047 CATIPQ7Z7H3 387 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 PNMA1Q8ND90 353 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 BRF1Q92994 677 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 MYL10Q9BUA6 226 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 BEGAINQ9BUH8 593 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 RPAP3Q9H6T3 665 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-206ENST00000597047 VCPKMTQ9H867 229 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 TCP11L1Q9NUJ3 509 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 KCNH4Q9UQ05 1017 aa10.9□□□□□ -0.66
ZNF548-206ENST00000597047 KLF18A0A0U1RQI7 1052 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 PDHXO00330 501 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 SH2B2O14492 632 aaPredicted RBP10.89□□□□□ -0.67
ZNF548-206ENST00000597047 DHX16O60231 1041 aaKnown RBP10.89□□□□□ -0.67
ZNF548-206ENST00000597047 TRPA1O75762 1119 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 BMP3P12645 472 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 RXRAP19793 462 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 OSBPP22059 807 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 SLC1A4P43007 532 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 ANAPC15P60006 121 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 IRX3P78415 501 aaPredicted RBP10.89□□□□□ -0.67
ZNF548-206ENST00000597047 EXOSC10Q01780 885 aaKnown RBP10.89□□□□□ -0.67
ZNF548-206ENST00000597047 STK3Q13188 491 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 RCSD1Q6JBY9 416 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 DGKHQ86XP1 1220 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 FAM43AQ8N2R8 423 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 IGDCC4Q8TDY8 1250 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 PIBF1Q8WXW3 757 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 MKL1Q969V6 931 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 TMEM87BQ96K49 555 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 TTC14Q96N46 770 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 PTPN18Q99952 460 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 KIAA1683Q9H0B3 1180 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 ZSWIM6Q9HCJ5 1215 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 VAT1LQ9HCJ6 419 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 CTDP1Q9Y5B0 961 aaPredicted RBP10.89□□□□□ -0.67
ZNF548-206ENST00000597047 PLIN4Q96Q06 1357 aa10.89□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L15C9J2P7 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 TMEM232C9JQI7 657 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L11C9JVI0 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L18D6R9N7 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L22D6RA61 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L19D6RCP7 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L20D6RJB6 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 IGF2BP3O00425 579 aaKnown RBP eCLIP10.88□□□□□ -0.67
ZNF548-206ENST00000597047 FLOT1O75955 427 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 TBC1D8O95759 1140 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 CYP2C8P10632 490 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 VCAM1P19320 739 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms