RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 IMMTQ16891 758 aaKnown RBP21.62■■□□□ 1.05
ZNF558-204ENST00000596172 FAM47AQ5JRC9 791 aa21.62■■□□□ 1.05
ZNF558-204ENST00000596172 MFSD6Q6ZSS7 791 aa21.62■■□□□ 1.05
ZNF558-204ENST00000596172 CEP95Q96GE4 821 aa21.62■■□□□ 1.05
ZNF558-204ENST00000596172 MCOLN1Q9GZU1 580 aa21.62■■□□□ 1.05
ZNF558-204ENST00000596172 MYH8P13535 1937 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 GREB1LQ9C091 1923 aaPredicted RBP21.61■■□□□ 1.05
ZNF558-204ENST00000596172 TSPY2A6NKD2 308 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 GNRH1P01148 92 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 NOVP48745 357 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 HERVK_113P62684 666 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 ATP2B2Q01814 1243 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 FAM110CQ1W6H9 321 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 KIAA1755Q5JYT7 1200 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 OTOP1Q7RTM1 612 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 RPAP3Q9H6T3 665 aaPredicted RBP21.61■■□□□ 1.05
ZNF558-204ENST00000596172 EFCC1Q9HA90 598 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 GOPCQ9HD26 462 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 CLIP2Q9UDT6 1046 aa21.61■■□□□ 1.05
ZNF558-204ENST00000596172 WDR46O15213 610 aaKnown RBP21.6■■□□□ 1.05
ZNF558-204ENST00000596172 RANBP6O60518 1105 aaKnown RBP21.6■■□□□ 1.05
ZNF558-204ENST00000596172 CAP1Q01518 475 aa21.6■■□□□ 1.05
ZNF558-204ENST00000596172 PTH1RQ03431 593 aa21.6■■□□□ 1.05
ZNF558-204ENST00000596172 LBX2Q6XYB7 198 aa21.6■■□□□ 1.05
ZNF558-204ENST00000596172 TBC1D10CQ8IV04 446 aa21.6■■□□□ 1.05
ZNF558-204ENST00000596172 ESYT1Q9BSJ8 1104 aa21.6■■□□□ 1.05
ZNF558-204ENST00000596172 TCP11L1Q9NUJ3 509 aa21.6■■□□□ 1.05
ZNF558-204ENST00000596172 MORF4L1Q9UBU8 362 aa21.6■■□□□ 1.05
ZNF558-204ENST00000596172 COG2Q14746 738 aa21.59■■□□□ 1.05
ZNF558-204ENST00000596172 ANKRD13CQ8N6S4 541 aa21.59■■□□□ 1.05
ZNF558-204ENST00000596172 MAP4K1Q92918 833 aa21.59■■□□□ 1.05
ZNF558-204ENST00000596172 IL17RBQ9NRM6 502 aa21.59■■□□□ 1.05
ZNF558-204ENST00000596172 HOXC10Q9NYD6 342 aa21.59■■□□□ 1.05
ZNF558-204ENST00000596172 TRIM17Q9Y577 477 aa21.59■■□□□ 1.05
ZNF558-204ENST00000596172 U3KPZ7 1027 aaPredicted RBP21.59■■□□□ 1.05
ZNF558-204ENST00000596172 FBXO46Q6PJ61 603 aaPredicted RBP21.58■■□□□ 1.05
ZNF558-204ENST00000596172 TOMM22Q9NS69 142 aa21.58■■□□□ 1.05
ZNF558-204ENST00000596172 RBPJLQ9UBG7 517 aa21.58■■□□□ 1.05
ZNF558-204ENST00000596172 F5H6K3 240 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 CDC45O75419 566 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 PSMC4P43686 418 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 PRMT2P55345 433 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 KLRC3Q07444 240 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 CASC1Q6TDU7 716 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 KIAA1211Q6ZU35 1233 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 SPICE1Q8N0Z3 855 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 GMCL1P1Q8NEA9 526 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 ESR2Q92731 530 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 ARHGAP39Q9C0H5 1083 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 RABGAP1Q9Y3P9 1069 aa21.57■■□□□ 1.04
ZNF558-204ENST00000596172 MYPNQ86TC9 1320 aa21.56■■□□□ 1.04
ZNF558-204ENST00000596172 CTGFP29279 349 aa21.56■■□□□ 1.04
ZNF558-204ENST00000596172 FCGRTP55899 365 aa21.56■■□□□ 1.04
ZNF558-204ENST00000596172 RRP12Q5JTH9 1297 aaKnown RBP21.56■■□□□ 1.04
ZNF558-204ENST00000596172 POTEEQ6S8J3 1075 aa21.56■■□□□ 1.04
ZNF558-204ENST00000596172 GPRC5AQ8NFJ5 357 aa21.56■■□□□ 1.04
ZNF558-204ENST00000596172 TRIM47Q96LD4 638 aa21.56■■□□□ 1.04
ZNF558-204ENST00000596172 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
ZNF558-204ENST00000596172 PTPN22Q9Y2R2 807 aa21.56■■□□□ 1.04
ZNF558-204ENST00000596172 SPDYE16A6NNV3 312 aaPredicted RBP21.55■■□□□ 1.04
ZNF558-204ENST00000596172 NDUFB10O96000 172 aa21.55■■□□□ 1.04
ZNF558-204ENST00000596172 HOXD10P28358 340 aa21.55■■□□□ 1.04
ZNF558-204ENST00000596172 TTC14Q96N46 770 aa21.55■■□□□ 1.04
ZNF558-204ENST00000596172 KRT23Q9C075 422 aa21.55■■□□□ 1.04
ZNF558-204ENST00000596172 LSG1Q9H089 658 aaKnown RBP21.55■■□□□ 1.04
ZNF558-204ENST00000596172 CNNM2Q9H8M5 875 aa21.55■■□□□ 1.04
ZNF558-204ENST00000596172 TXNRD2Q9NNW7 524 aa21.55■■□□□ 1.04
ZNF558-204ENST00000596172 NEDD4P46934 1319 aa21.55■■□□□ 1.04
ZNF558-204ENST00000596172 NMT2O60551 498 aa21.54■■□□□ 1.04
ZNF558-204ENST00000596172 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
ZNF558-204ENST00000596172 CYP21A2P08686 494 aa21.54■■□□□ 1.04
ZNF558-204ENST00000596172 DSG3P32926 999 aa21.54■■□□□ 1.04
ZNF558-204ENST00000596172 MB21D1Q8N884 522 aa21.54■■□□□ 1.04
ZNF558-204ENST00000596172 ABHD8Q96I13 439 aa21.54■■□□□ 1.04
ZNF558-204ENST00000596172 STX8Q9UNK0 236 aa21.54■■□□□ 1.04
ZNF558-204ENST00000596172 FLOT1O75955 427 aa21.53■■□□□ 1.04
ZNF558-204ENST00000596172 ERVK-9P63128 1117 aa21.53■■□□□ 1.04
ZNF558-204ENST00000596172 ERVK-24P63145 666 aa21.53■■□□□ 1.04
ZNF558-204ENST00000596172 CCDC178Q5BJE1 867 aa21.53■■□□□ 1.04
ZNF558-204ENST00000596172 SRRDQ9UH36 339 aa21.53■■□□□ 1.04
ZNF558-204ENST00000596172 ADAMTS5Q9UNA0 930 aa21.53■■□□□ 1.04
ZNF558-204ENST00000596172 CNMDO75829 334 aa21.52■■□□□ 1.04
ZNF558-204ENST00000596172 Q3C1V9 767 aa21.52■■□□□ 1.04
ZNF558-204ENST00000596172 FAM83BQ5T0W9 1011 aa21.52■■□□□ 1.04
ZNF558-204ENST00000596172 SLFN13Q68D06 897 aa21.52■■□□□ 1.04
ZNF558-204ENST00000596172 DGKHQ86XP1 1220 aa21.52■■□□□ 1.04
ZNF558-204ENST00000596172 LRRC47Q8N1G4 583 aaKnown RBP21.52■■□□□ 1.04
ZNF558-204ENST00000596172 NKX2-3Q8TAU0 364 aa21.52■■□□□ 1.04
ZNF558-204ENST00000596172 GMCL1Q96IK5 515 aa21.52■■□□□ 1.04
ZNF558-204ENST00000596172 ZSWIM5Q9P217 1185 aa21.52■■□□□ 1.04
ZNF558-204ENST00000596172 RBM8AQ9Y5S9 174 aaKnown RBP21.52■■□□□ 1.04
ZNF558-204ENST00000596172 RAD21O60216 631 aa21.51■■□□□ 1.03
ZNF558-204ENST00000596172 KDM4AO75164 1064 aa21.51■■□□□ 1.03
ZNF558-204ENST00000596172 TOP1P11387 765 aaKnown RBP21.51■■□□□ 1.03
ZNF558-204ENST00000596172 CCNA1P78396 465 aa21.51■■□□□ 1.03
ZNF558-204ENST00000596172 RCSD1Q6JBY9 416 aa21.51■■□□□ 1.03
ZNF558-204ENST00000596172 IQCA1Q86XH1 822 aa21.51■■□□□ 1.03
ZNF558-204ENST00000596172 ANKS1AQ92625 1134 aa21.51■■□□□ 1.03
ZNF558-204ENST00000596172 PPP1R9AQ9ULJ8 1098 aa21.51■■□□□ 1.03
ZNF558-204ENST00000596172 HPS5Q9UPZ3 1129 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms